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Name : deoA (Sfri_1003) Accession : YP_749694.1 Strain : Shewanella frigidimarina NCIMB 400 Genome accession: NC_008345 Putative virulence/resistance : Unknown Product : thymidine phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : 2.4.2.4 Position : 1173712 - 1175043 bp Length : 1332 bp Strand : + Note : Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate DNA sequence : ATGTTTTTAGCTCAAGAAATTATTCGTAAAAAACGTAATGGCGATGTATTAAGCACTGCAGAAATTCAATTCTTTGTTGA TGGCATTACTCATAACACGGTTTCAGAAGGCCAAATTGCTGCGTTCGGCATGGCAGTGTATTTCAAAGATATGAATATGG ATGAACGGATTGCATTAACGATTGCGATGCGTGATTCCGGAACCGTATTAAATTGGGATTCTCTGGGCCTCAATGGCCCG ATTATCGATAAGCATAGCACTGGTGGTGTTGGCGATGTAATCAGCCTAATGCTTGGCCCTATGGCTGCAGCTTGTGGCGG TTATGTGCCAATGATTTCAGGTCGTGGCTTAGGTCACACCGGTGGTACGTTAGATAAATTTGATGCCATTCCTGGTTATC AAACTGAGCCTTCAAGTGAATTATTCCGCAAAGTGGTTAAAGACGCTGGTGTTGCCATTATTGGTCAAACCGGTGACTTA GTCCCTGCTGATAAGCGTTTCTATTCGATTCGTGATAATACCGCCACCGTTGAATCTATTTCGTTAATCACCGCATCTAT TTTATCTAAAAAGTTAGCCGCGGGGCTTGATGCTCTAGCAATGGATGTCAAAGTCGGCAGCGGTGCATTTATGCCAACTT ATGAAGCATCTGAAGAATTAGCTCGCAGTATTACTGCTGTTGCTAATGGCGCAGGAACTAAAACAACGGCATTGTTAACT GACATGAACCAAGTATTGGCTTCGTGTGCAGGTAATGCGGTTGAGGTTCGTGAGGCGATAAACTTTTTGACTGGTCAATA TCGTAATCCACGTTTATATGCTGTCACCATGGGATTATGTGCAGAAATGCTAATTTTGGGTGGTATTGCACAGAATGAAG CTGAAGCTCGTCATAAACTAAATACTGTATTAGATAATGGTAAAGCAGCAGAGGCTTTTGCTAAAATGGTATCTGGCTTA GGTGGCCCAACAGACTTTGTTGAGGCATATGATAAGTATTTACCTCATGCGAAAATTGTACGACCTGTATATGCCAACAC ATCTGGCTTTGCTTACAAAATGGATACACGAGAACTTGGTTTAGCCGTAGTGACCTTAGGTGGTGGACGTCGCAAACCAG GTGATGCACTGGATTACAGTGTTGGATTAACTCAAGTATGCGCATTGGGTCAGGAAGTTAACAAAGACGTTCCGTTAGCG ATGATCCATGCTCAATCTGAAGATGCTTTCGCCGAAGCTGCCGCTGCTATTCAGCAAGCCATTATTATTGGTGATAGCGC GCCTGAGAAAACGCCTGAAATATATCGTTATATTCGCGCTTCAGATTTATAA Protein sequence : MFLAQEIIRKKRNGDVLSTAEIQFFVDGITHNTVSEGQIAAFGMAVYFKDMNMDERIALTIAMRDSGTVLNWDSLGLNGP IIDKHSTGGVGDVISLMLGPMAAACGGYVPMISGRGLGHTGGTLDKFDAIPGYQTEPSSELFRKVVKDAGVAIIGQTGDL VPADKRFYSIRDNTATVESISLITASILSKKLAAGLDALAMDVKVGSGAFMPTYEASEELARSITAVANGAGTKTTALLT DMNQVLASCAGNAVEVREAINFLTGQYRNPRLYAVTMGLCAEMLILGGIAQNEAEARHKLNTVLDNGKAAEAFAKMVSGL GGPTDFVEAYDKYLPHAKIVRPVYANTSGFAYKMDTRELGLAVVTLGGGRRKPGDALDYSVGLTQVCALGQEVNKDVPLA MIHAQSEDAFAEAAAAIQQAIIIGDSAPEKTPEIYRYIRASDL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 3e-66 | 41 |
