Gene Information

Name : Neut_0088 (Neut_0088)
Accession : YP_746341.1
Strain : Nitrosomonas eutropha C91
Genome accession: NC_008344
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG4372
EC number : -
Position : 87845 - 89242 bp
Length : 1398 bp
Strand : -
Note : KEGG: rme:Rmet_2351 putative secreted protein

DNA sequence :
ATGCGCAGTAACGGACTTCTCAAGTGGCTGATGATTCCGGTGGCCCTACTGGTGCTTTTTGCGGGTATCCGCCTGCTATC
CGGTGGCGACACGACCCGTTCAGGCGCTGCGGGTTCCGGCAGTCAGCTCACGCCCGAAGAGATGCAGGCGCTGGGCATCG
AGGGCGATACTCCGCACGATACTGTGGCGACGCTCGTGGCGCAGGTCAAGCAGATGCGCACCGAACTGCAGACGGCGCAG
GCCGACAACAAGACACAACGCAGCGAGAACGCGCGTCTGCGCCAGCGCGAGACCGCCATTGACCAGCGCATCAATTCCGC
ACTGGAGTCGGAACGCAGCACCCTGCAACGCGACCAGGCCAAGCTTGCCAACGAACGCCAGCAGACCGAAGGTTTGTTGC
AGGACTTGCAGCGCCGTCTGGAAAGTCTCGGTAATACCGATCTGCCCGTCGGTCTGGGTCTGCGCGAGGGGGATGCGGAT
GGCTTTGGGGCAGGTGCCGGTATCCGCTGGATTGAACCGGATGATGCCCAGCAGGTCGATGGCCGCAATCGCAGCAGTAG
TCTGAGTTTTCCAACGAGTTTCGGCCCCGCGCAAAAGACACTGGAAACCACCGTCGGCCGCGTGGCCGACGCCGGTGCCA
AGGCTGCCGGGGTGAGCTCCGCCAAGGCGGTCTATACGGTGCCGACCAACTCAACTTTGATGGGCTCAGTCGCCATGACG
GCGTTGATTGGCCGCGTGCCCATCGACGGTACGGTCAACGATCCGTATCCCTTCAAGGTCATTGTCGGGCCGGACAATCT
GACCGCCAACGGCATCGACATTCCCGATGTGGCGGGGGCTGTGTTCAGCGGCACCGCCTCGGGCGACTGGACGTTGTCAT
GTGTGCGCGGACAGGTGCGCAGCATCACGTTTGTCTTTCATGACGGTACGATTCGCACCATCCCTAAAGACAGCGAGCGA
AATAATCAGCGCAACAACCAGGAGGATGGCCTGGGCTGGATTAGCGACCCGTTCGGTATTCCTTGCGTGTCGGGCGATCG
ACGCAGCAATGCTCAGCAGTACTTGGGTACGCAGGCTTTGATTACCGCCGCCGGTGCGGGCGCGGCATCGCTCATCGATT
CAGACAGCGGACGGATGTCCTACGTGGGGGCCGACGGATCGATTGGCACCACAGGCATTACCGGCAACGAGGCCATGGGT
CAGATTCTGGCCGGTGGCGTGCGGGACATGTCGCAGTGGGTCAACAAGCTCTACGGTCAAGCCTTCGCCGCTGTGTATGT
ACAGCCCGGCGCCAAGGTGGCCGTCCATCTGGAAAAACCTCTGGCCATCGATTATGAGCCGCAAGGGCGCCGGGTCGATC
ACCGTATAGGAGAAGCCCATGCGCTTGAACTCGATTAA

Protein sequence :
MRSNGLLKWLMIPVALLVLFAGIRLLSGGDTTRSGAAGSGSQLTPEEMQALGIEGDTPHDTVATLVAQVKQMRTELQTAQ
ADNKTQRSENARLRQRETAIDQRINSALESERSTLQRDQAKLANERQQTEGLLQDLQRRLESLGNTDLPVGLGLREGDAD
GFGAGAGIRWIEPDDAQQVDGRNRSSSLSFPTSFGPAQKTLETTVGRVADAGAKAAGVSSAKAVYTVPTNSTLMGSVAMT
ALIGRVPIDGTVNDPYPFKVIVGPDNLTANGIDIPDVAGAVFSGTASGDWTLSCVRGQVRSITFVFHDGTIRTIPKDSER
NNQRNNQEDGLGWISDPFGIPCVSGDRRSNAQQYLGTQALITAAGAGAASLIDSDSGRMSYVGADGSIGTTGITGNEAMG
QILAGGVRDMSQWVNKLYGQAFAAVYVQPGAKVAVHLEKPLAIDYEPQGRRVDHRIGEAHALELD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C49 AAN62143.1 hypothetical protein Not tested PAGI-2(C) Protein 8e-161 80
ORF SG59 AAN62281.1 hypothetical protein Not tested PAGI-3(SG) Protein 2e-133 70
pph82 CAI36123.1 hypothetical protein Not tested PPHGI-1 Protein 1e-95 50
EXA35 ABD94644.1 conserved hypothetical protein Not tested ExoU island A Protein 3e-96 48
RL024 AAP84151.1 conserved hypothetical protein Not tested PAPI-1 Protein 5e-92 48
unnamed ABR13364.1 hypothetical protein Not tested PAGI-5 Protein 4e-96 47
PMI2579 YP_002152298.1 hypothetical protein Not tested Not named Protein 4e-73 42
YE3484 YP_001007643.1 hypothetical protein Not tested YAPI Protein 3e-70 41