Gene Information

Name : Neut_0742 (Neut_0742)
Accession : YP_746977.1
Strain : Nitrosomonas eutropha C91
Genome accession: NC_008344
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : 3.6.3.15
Position : 761122 - 762528 bp
Length : 1407 bp
Strand : -
Note : KEGG: neu:NE2086 flagellar ATP synthase; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; H+-transporting two-sector ATPase, alpha/beta subunit domain pro

DNA sequence :
ATGGACACCATCGGGCCGACACATACCTCGCTCTGGCGCGGCTTCATTCAGAATTGCCAACAACTGATTGAGCCTGTCAA
CCCTCTGCTCATCAGCGGTACACTGACCCGTGTAGCCGGATTGGTGATGGAGGCAGTCGGCCTCAAACTGGCAGTGGGGA
CCAGTTGTATTGTTTTTCTGCCAAATGGCACCAGTGTTACAGCGGAGGTAGTCGGCTTTTCCGGAGAACGGCTTTTCCTG
ATGCCATCCGGCGATATCTACGGGCTGACTCCCGGCGCAAAAGTAGTTCCAGTTGAATATACCGGTACACCTCCCCGCAT
CGGGGCGATACAGCATCCGCGACGACGTGCAGCTGACCGGGCAAAGCACATCAGTGTCGGCCCGGAACTGCTGGGGCGTG
TCCTGAACGGAGTCGGTGAACCACTTGATCGGCTCGGTCCGCTCCAGTGCGGGCACAACGTTCCACTTTATGGCCGTCCA
TTCAATCCACTGGAACGGGCACCCATCGAAAAAATACTGGATGTTGGCGTGCGTGCGATTAACACCCTGTTGAGCGTGGG
TCGTGGCCAGCGCATGGGATTGTTTGCCGGTAGTGGTGTGGGTAAAAGTGTCTTGCTCGGCATGATGGCGCGTTATACCA
GCGCGGATGTTATCGTGGTAGCACTGATCGGGGAACGGGGCCGGGAAGTGCAGGAATTCATCGAAACCATTCTGGGAGAG
GAAGGCCTGGCACGCTCAGTGGTCGTGGCTGCCCCGGCTGATACCTCACCACTAATGCGGTTGCATGGCGCTGCCTACGC
GACAGCGATAGCTGAATATTTCCGCGATGAAGGCAAGCATGTGCTGCTGATCATGGATTCACTCACCCGCTTTGCCATGG
CACAACGCGAGATTTCACTTGCCATTGGCGAACCGCCTGCCACTAAGGGTTATCCTCCCTCGGTATTTGCTCGCTTGCCC
CAACTGGTAGAACGCGCTGGCAATGGCCGACGGGGCAGTGGATCAATTACCGCCTTTTATACCGTGCTGGCCGAAAATGA
TGATCCAAACGATCCCATCGCTGATAATGCACGCGCCATTCTCGATGGTCACATTGTTCTTTCACGACACTTGGCCGACG
CCGGTCATTACCCGGCGATAGATATAGAGTCCTCGATCAGCCGGGTGATGGCCAGCTTGGTAACACGCGAGCAGCTTGGT
CAGGCGCAGCGTTTCAAGGCGCTGTACTCTCGCTACCAGCGCAGCCATGATCTGATCAGCGTTGGCGCATATATCAGTGG
CACTGATCCTCAACTGGATCAGGCTATCGCGCTTTATCCGGCACTCGAATCTTTCCTGCAGCAAGGCATGTTCGAGCAGG
AAAACTATGCCAAAAGCATGGACAAACTAACTACCCTGAATCTGTAA

Protein sequence :
MDTIGPTHTSLWRGFIQNCQQLIEPVNPLLISGTLTRVAGLVMEAVGLKLAVGTSCIVFLPNGTSVTAEVVGFSGERLFL
MPSGDIYGLTPGAKVVPVEYTGTPPRIGAIQHPRRRAADRAKHISVGPELLGRVLNGVGEPLDRLGPLQCGHNVPLYGRP
FNPLERAPIEKILDVGVRAINTLLSVGRGQRMGLFAGSGVGKSVLLGMMARYTSADVIVVALIGERGREVQEFIETILGE
EGLARSVVVAAPADTSPLMRLHGAAYATAIAEYFRDEGKHVLLIMDSLTRFAMAQREISLAIGEPPATKGYPPSVFARLP
QLVERAGNGRRGSGSITAFYTVLAENDDPNDPIADNARAILDGHIVLSRHLADAGHYPAIDIESSISRVMASLVTREQLG
QAQRFKALYSRYQRSHDLISVGAYISGTDPQLDQAIALYPALESFLQQGMFEQENYAKSMDKLTTLNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 5e-75 55
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 1e-67 50
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 1e-67 50
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 5e-80 48
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 7e-80 48
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-80 47
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 1e-80 47
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 1e-80 47
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 1e-80 47
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-80 47
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 6e-76 47
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 6e-76 47
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 2e-68 47
escN YP_003223475.1 translocator EscN Virulence LEE Protein 2e-68 47
unnamed AAL06369.1 EscN Virulence LEE Protein 2e-68 47
escN CAI43874.1 EscN protein Virulence LEE Protein 1e-68 47
lscN AAO18044.1 LscN Virulence TTSS locus Protein 9e-76 46
escN AAC38383.1 EscN Virulence LEE Protein 3e-68 46
escN YP_003236088.1 translocator EscN Virulence LEE Protein 3e-68 46
escN AAL57542.1 EscN Virulence LEE Protein 5e-68 46
escN AAC31513.1 L0034 Virulence LEE Protein 4e-68 46
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 4e-68 46
escN CAC81862.1 EscN protein Virulence LEE II Protein 2e-68 46
escN NP_290268.1 hypothetical protein Virulence LEE Protein 5e-68 46
ECs4568 NP_312595.1 EscN Virulence LEE Protein 5e-68 46
escN AAK26715.1 EscN Virulence LEE Protein 5e-68 46
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 9e-60 45
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 4e-61 44
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 1e-60 44
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 3e-65 44
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-62 44
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 1e-62 44
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 2e-62 44
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-62 44
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-62 44
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 4e-61 43
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 2e-61 43
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 2e-54 43
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 2e-54 43
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 2e-64 42
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 4e-59 41
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 3e-59 41
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 2e-59 41
invC NP_461815.1 ATP synthase SpaL Virulence SPI-1 Protein 1e-53 41
invC YP_217813.1 ATP synthase SpaL Virulence SPI-1 Protein 1e-53 41
spaI NP_457288.1 secretory apparatus ATP synthase (associated with virulence) Virulence SPI-1 Protein 1e-53 41
spaI NP_806497.1 ATP synthase SpaL Virulence SPI-1 Protein 1e-53 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Neut_0742 YP_746977.1 flagellar protein export ATPase FliI VFG2331 Protein 9e-124 64
Neut_0742 YP_746977.1 flagellar protein export ATPase FliI VFG2499 Protein 1e-134 63
Neut_0742 YP_746977.1 flagellar protein export ATPase FliI VFG1254 Protein 1e-117 61
Neut_0742 YP_746977.1 flagellar protein export ATPase FliI VFG2144 Protein 7e-81 47
Neut_0742 YP_746977.1 flagellar protein export ATPase FliI VFG0192 Protein 7e-81 46
Neut_0742 YP_746977.1 flagellar protein export ATPase FliI VFG0390 Protein 6e-78 46
Neut_0742 YP_746977.1 flagellar protein export ATPase FliI VFG0730 Protein 2e-68 46
Neut_0742 YP_746977.1 flagellar protein export ATPase FliI VFG0812 Protein 2e-68 46
Neut_0742 YP_746977.1 flagellar protein export ATPase FliI VFG0048 Protein 1e-78 45
Neut_0742 YP_746977.1 flagellar protein export ATPase FliI VFG0515 Protein 6e-63 44
Neut_0742 YP_746977.1 flagellar protein export ATPase FliI VFG1778 Protein 1e-54 44
Neut_0742 YP_746977.1 flagellar protein export ATPase FliI VFG1008 Protein 3e-54 41
Neut_0742 YP_746977.1 flagellar protein export ATPase FliI VFG0555 Protein 4e-54 41