Gene Information

Name : Neut_0361 (Neut_0361)
Accession : YP_746606.1
Strain : Nitrosomonas eutropha C91
Genome accession: NC_008344
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 364924 - 365541 bp
Length : 618 bp
Strand : +
Note : PFAM: Integrase, catalytic region; KEGG: lpf:lpl1576 hypothetical protein

DNA sequence :
ATGCGAGAAGCAGATGTGCAAGTGAGGCACCGGAAAAAGTACAAGGTCACAACTAACAGTAATCACAAACAACCGATATT
TGAGAATAGGCTGAATCGGCAATTTGATGTTGCAGCCCCCAATCAAATCTACGTTGGTGACATTACCTGCATTTGGACCC
GGGAAGGCTGGTTGTATCTGGCGGTGGTCATTGATTTGTTTTCCAGGAAGGTGGTGGGTTGGAGCATGAGTTCAAGAATG
AAAGCAAAGCTGGTTTGTGATGCATTGAGAATGGCTGTCTGGCAGCGTCAACCACAACCTGGATTGATTGTACATTCAGA
TCGTGGATCGCAATATGCCAGTAAGCAGTACCGCCAACTTTTAAAAATACACGGCTTTATCGGCAGTATGAGTCGTAGGG
GAAATTGTTGGGATAATTCAGTGGCTGAAAGCTTTTTCGGTAGCCTTAAACGGGAGCAAATCCACTGGCAACATTATCCA
ACCCGCCATAAAGCACAACAAGATGTACTGCAGTATATTTCCATGTTCTATAACAGCCAGCGACTGCATTCATACCCGGG
TTACAAAAACCCGAATCAATATGAGATGGAAATGGAAATAGTGAAAAATGTTGCTTAA

Protein sequence :
MREADVQVRHRKKYKVTTNSNHKQPIFENRLNRQFDVAAPNQIYVGDITCIWTREGWLYLAVVIDLFSRKVVGWSMSSRM
KAKLVCDALRMAVWQRQPQPGLIVHSDRGSQYASKQYRQLLKIHGFIGSMSRRGNCWDNSVAESFFGSLKREQIHWQHYP
TRHKAQQDVLQYISMFYNSQRLHSYPGYKNPNQYEMEMEIVKNVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 1e-31 47
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 1e-31 47
unnamed AAC31485.1 L0006 Not tested LEE Protein 4e-30 45
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 5e-30 45
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 3e-30 45
Z5089 NP_290241.1 transposase Not tested LEE Protein 4e-30 45
unnamed CAI43898.1 putative transposase Not tested LEE Protein 8e-31 44
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 8e-31 44
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 4e-32 44
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 4e-32 44
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 4e-32 44
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 3e-32 44
ECO111_3779 YP_003236114.1 putative IS602 transposase OrfB Not tested LEE Protein 9e-31 44
unnamed AAF09022.1 unknown Not tested SHI-O Protein 3e-32 43
unnamed AAF09030.1 unknown Not tested SHI-O Protein 3e-32 43
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 3e-32 43
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 3e-32 43
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 2e-32 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Neut_0361 YP_746606.1 integrase catalytic subunit VFG1484 Protein 5e-32 47
Neut_0361 YP_746606.1 integrase catalytic subunit VFG0785 Protein 1e-30 45
Neut_0361 YP_746606.1 integrase catalytic subunit VFG1706 Protein 1e-32 44