|
Name : Neut_2378 (Neut_2378) Accession : YP_748557.1 Strain : Nitrosomonas eutropha C91 Genome accession: NC_008344 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 2494907 - 2496304 bp Length : 1398 bp Strand : - Note : KEGG: neu:NE0194 replicative DNA helicase protein; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase, N-terminal domain protein; DnaB domain protein helicase, C-terminal domain protein; SMART: AAA ATPase DNA sequence : ATGAATCCATCCACTACCAACTTTATTCAGAACCTTGCTGATAACAGTATTTACAAGCTCCCGCCCCACTCCATCGAGGC TGAACAATCCGTCCTTGGTGGACTCATGCTGGATAATCAGGCATGGGACAAAGTAGCGGACATCATTATCGAGAGTGATT TCTATCGCCAGGATCATCAACTCATTTACCAACACATCTGCCGGCTTATAGAACAAAGTAAGCCGGCAGATGTAATAACT GTTGCAGAATCTCTTGAAAATGCGGCCCAACTGCAACACGCGGGTGGGCTAGCCTATATCGGTGCCATTGCACAGAATAC TCCGTCTGCAGCCAACATCCGCCGTTATGCGGAAATCGTACGGGAACGTTCAATCATGCGCAAGCTGGCGCAAGTCAGCA CACAAATAACTGATTCAGCTTACAATCCTGCAGGCCGTTCTGCGGGTGATCTGCTGGATGAAGCAGAAAGCAGAATATTT GAAATCGCTGAACAAAGTGCGCACGGGAAACAAGGATTTGTTGATATCCAACCATTGCTCAAGCAAGTAGTTGAGCGAAT CGAGATGCTCTATAACCGGAGCAATCCCAGCGATATTACCGGCATTCCATCCGGCTTCAGCGATCTCGATCAAAAAACTT CTGGTTTCCAAGCCGGTGACCTGATCATCGTTGCCGGGCGACCTTCGATGGGAAAAACCGCCTTTGCGCTCAATATCGGA GAACATGTCGCACTGGAAGCTGGCAAACCAGTGGCAGTGTTCAGTATGGAAATGGGGGGCGCACAGCTTGCCATGCGTAT GTTGGGCTCAATCGGGCGATTGGATCAACACAAAGTACGCACAGGCCAACTGGATGATGATGACTGGCCCAGACTCACCC ATGCATTGGGAAAGCTAAACGATGCGCCGATATTTATTGATGAAAGTGCTGCACTGAACTCTCTGGAGCTGCGTGCCCGC GCTCGGCGTTTGTATCGTCAGCATGAAGGGCTGGGGCTCATCATTATTGACTACCTGCAACTCATGTCATCAACCTCGCC CAACAGTGAAAGCCGCGCCGCCGAAATTTCAGAGATTTCACGCTCACTGAAGGCACTGGCAAAAGAATTGCAGGTTCCCG TAATCGCTTTGTCGCAGCTGAATCGTGGCCTCGAACAACGCCCCAACAAACGTCCGATTATGTCTGATTTGCGTGAATCA GGCGCTATCGAACAGGATGCAGATGTTATTTTGTTTATTTATCGGGATGAAGTTTATAATCCGGATACTCAGGACAAGGG TATTGCTGAAATTATCATCGGCAAGCAGCGTAACGGGCCGATTGGCAAAGTTGATCTGACTTTTCTGGGCGAATTTACAA GATTTGAAAATTGTGCACGTACCGCTGACTATTACTGA Protein sequence : MNPSTTNFIQNLADNSIYKLPPHSIEAEQSVLGGLMLDNQAWDKVADIIIESDFYRQDHQLIYQHICRLIEQSKPADVIT VAESLENAAQLQHAGGLAYIGAIAQNTPSAANIRRYAEIVRERSIMRKLAQVSTQITDSAYNPAGRSAGDLLDEAESRIF EIAEQSAHGKQGFVDIQPLLKQVVERIEMLYNRSNPSDITGIPSGFSDLDQKTSGFQAGDLIIVAGRPSMGKTAFALNIG EHVALEAGKPVAVFSMEMGGAQLAMRMLGSIGRLDQHKVRTGQLDDDDWPRLTHALGKLNDAPIFIDESAALNSLELRAR ARRLYRQHEGLGLIIIDYLQLMSSTSPNSESRAAEISEISRSLKALAKELQVPVIALSQLNRGLEQRPNKRPIMSDLRES GAIEQDADVILFIYRDEVYNPDTQDKGIAEIIIGKQRNGPIGKVDLTFLGEFTRFENCARTADYY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 9e-92 | 52 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 1e-80 | 48 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 5e-82 | 48 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 3e-82 | 48 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 1e-82 | 48 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 2e-81 | 47 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 3e-80 | 46 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 3e-80 | 46 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 1e-64 | 44 |
