Gene Information

Name : Neut_2060 (Neut_2060)
Accession : YP_748248.1
Strain : Nitrosomonas eutropha C91
Genome accession: NC_008344
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliQ
Function : -
COG functional category : N : Cell motility
COG ID : COG1987
EC number : -
Position : 2176594 - 2176869 bp
Length : 276 bp
Strand : +
Note : TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ, family 3; KEGG: neu:NE0460 bacterial export proteins, family 3 (FliQ)

DNA sequence :
ATGAGCCCAGAACAGGCAATGACTATCGGCCGACAGGCGTTGGAAATTACATTCACAATCGCTGCACCTTTATTGCTGGC
AGCGTTGGTGACAGGTCTGGCCATCAGTATCTTCCAGGCTGCCACACAGATCAATGAAATGACTTTGTCATTCATTCCTA
AACTGCTGGCTATCTTCCTTACCCTAGCGCTGGCTGGCCCCTGGATGTTACAAATCATACTTGACTACATTGAAAGGCTT
TACACCAGTATTCCCTGGATTATCAACGGTGGATAG

Protein sequence :
MSPEQAMTIGRQALEITFTIAAPLLLAALVTGLAISIFQAATQINEMTLSFIPKLLAIFLTLALAGPWMLQIILDYIERL
YTSIPWIINGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
escS AFO66341.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 1e-06 42
escS AFO66401.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 1e-06 42
escS AAL57528.1 EscS Virulence LEE Protein 3e-06 41
escS CAC81848.1 EscS protein Virulence LEE II Protein 3e-06 41
unnamed AAL06355.1 EscS Virulence LEE Protein 2e-06 41
escS YP_003223489.1 T3SS structure protein EscS Virulence LEE Protein 5e-06 41
escS YP_003232139.1 T3SS structure protein EscS Virulence LEE Protein 5e-06 41
escS CAI43888.1 EscS protein Virulence LEE Protein 7e-06 41
escS AAK26701.1 EscS Virulence LEE Protein 3e-06 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Neut_2060 YP_748248.1 flagellar biosynthetic protein FliQ VFG2339 Protein 3e-17 63
Neut_2060 YP_748248.1 flagellar biosynthetic protein FliQ VFG2495 Protein 1e-10 62
Neut_2060 YP_748248.1 flagellar biosynthetic protein FliQ VFG2015 Protein 8e-14 48
Neut_2060 YP_748248.1 flagellar biosynthetic protein FliQ VFG1260 Protein 3e-14 48