|
Name : Neut_2022 (Neut_2022) Accession : YP_748210.1 Strain : Nitrosomonas eutropha C91 Genome accession: NC_008344 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 2136395 - 2139037 bp Length : 2643 bp Strand : + Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : TTGACAACATCTGGAAACTCAATAAATAAACCAGATCATTCCGCTCACACCCCCATGATGCAGCAATACCTGCGTATCAA AACACAGCATACCGACAAGCTGCTGTTTTACCGCATGGGAGATTTTTATGAGCTGTTTTATGAAGATGCCGAAAAAGCAG CCAGGTTGCTGGATATTACATTGACTCACCGTGGCTCCTCCGCCGGGGAGCCAATCAAAATGGCAGGTGTGCCATTTCAT GCGGCGGATCAATATCTGGCTAAATTGGTGAAACTAGGTGAATCCATTGCTATTTGTGAACAGATCGGCGATCCCGCTAC CAGCAAGGGGCCGGTAGAACGTCAGGTTGTTCGCATCATCACCCCTGGCACCCTGACTGATGCCGGGTTGCTGGAAGAAC GTGGCAACAGTATTGTATTGACACTGGCACTGCATCACGGCGTGATTGGTCTAGCTTGGCTCAACCTGGCAGCCGGGGAT ATGCGCGTACTGGAAACTTCCCCGGATAATCTGGCTAGCGAGCTGGAGCGTTTGCATCCATCAGAAATTTTGCTACCGGA ATCACTTGCTCTGCCTGTGATATTAAACAGTTTTACCGCCCCCAAACGCCTGCCGGATTGGCAATTTGATTATGAGCATG CTATGCAGCAGCTTACCCGGCAATTCGGTACCCGTGATCTGAATGCCTTTGGTTGTGAAGAGTTGCGTGCCGCAATCATG GCAGCCGGTGCGTTATTTGAATATGTCAGGCTGACGCAGCACACTGCAACCGATGAATCAGCAACACAGGTACTTGGTCA TTTGCAAACATTACGGGTGGAACGGCCAGAGACCTATTTGCGTATGGATGCCGCTACCCGCCGTAATCTTGAAATTACGC TGACATTACGTGGAGAAGAAGCTCCCACGCTATCATCCCTGCTGGACATCTGCGCAACCAGCATGGGTAGCCGGTTGTTG CGGCATTGGCTGCATCACCCGTTACGCAATCGTATCACCCTGCAGCAGCGACTGGATGCCGTTTCTGACTTGATTGGAGC AAAGCCGGGAATCCTCTATGCAGGTATCCGGGAGCGGCTCAAACATATCGCTGATATCGAACGTATCACCAGCCGAATTG CCTTAAGAACGGCCAGACCTCGTGATTTATCCGGTTTACGCGACAGCCTGACGGCACTTCCTGAAATTATCAAACTGATT ACAACCTCAACAGCTATTGCCATTCATCGTTTTGTCCCGGCCATGGAGCCAGATACTACACTCACACAACTGCTCGTTCA CGCGCTGCAGCCAGTGCCCGGCGCAGTAATTCGTGAAGGAGGCGTCATCGCTGACGGCTATGATGCTGAACTGGACGAAT TACGCGCTTTACAGAAGAATTGTGGTGAATTCCTGTTGCAACTGGAAGCACGGGAACGCGAGCGTACCGGCATTCCAACC CTTAAGGTGGAATATAACCGGGTACATGGTTTTTATATCGAGGTAACCCGCATCCATGGCGAAAAAATCCCCGCTGACTA TCGCCGCAGACAAACCTTGAAAAATGCGGAACGCTATAGCATCCCCGAGTTGCAGGTATTTGAGAACAAGACACTGACAG CACGTGAACAGGCATTGGCACAGGAAAAGAAACTGTACGAGCAGTTACTGGAACAACTGGCAGATTTCATCATTCCTTTA CAGGAAATTGCCCGCTCTGTTGCTGAACTGGATGTTCTGTGTGCTTTTGCTGAACGTGCAGATTTGTTTGGTTATACCAA ACCGGTATTTACTGATGATCCTGCTTTGGATATCGAAGCTGGGCGGCATCCGGTAGTGGAAAATCAAATAGAACAATACA TTGCCAATGATATACAGCTGGGTGCTGTCACGCGGGAAGGACGGCAGATGCTGATCATCACCGGCCCAAACATGGGCGGA AAATCTACCTACATGCGACAAACAGCGCTAATTATTCTGCTAGCGCATTGCGGTAGTTTTGTTCCAGCCGGGAGCGCCCG TATCGGCCCCATTGATCAGATTTTTACCCGGATTGGTGCAGCTGACGATCTGGCAGGGGGGCGTTCCACTTTCATGGTAG AAATGACGGAAGCCGCCAGTATTTTACGCAATGCAACCGCACAAAGCCTGGTGTTGGTGGATGAAATTGGCCGGGGAACT TCAACTTTTGACGGGCTTGCATTGGCTTTTGCCATCGCCCGCCACTTGCTGACTCAGAATCAGAGCTATACCTTGTTTGC CACGCACTACTTTGAACTGACCCGACTAGCAGAAGAATTTCCGCAGGCAATTAATGTACATGTCACCGCAGTGGAGCACA AGAGACGTATTGTCTTTCTTCACCGGATAGAGGAAGGATCTGCCAGCCGGAGTTATGGGCTGCATGTTGCCGCACTGGCA GGTGTGCCGGATAAAGTTATCCGAAATGCCGGAAAGATTCTGGCACAACTGGAGCAGGAAGCACTCAGCAAGAGTCCTCA GCAGACATTATTTGAAACAATTGAGGAAAACGCGGAAGCTGCTCCTGCTTCCGCGCATCCGGTGCTCGATTACCTTGAGC AACTTCACCCGGATGAGCTGACTCCCCGGGAGGCACTGGAACAGCTTTACCTCATTAAATCAATGGCCAATCGGATAAAA TAA Protein sequence : MTTSGNSINKPDHSAHTPMMQQYLRIKTQHTDKLLFYRMGDFYELFYEDAEKAARLLDITLTHRGSSAGEPIKMAGVPFH AADQYLAKLVKLGESIAICEQIGDPATSKGPVERQVVRIITPGTLTDAGLLEERGNSIVLTLALHHGVIGLAWLNLAAGD MRVLETSPDNLASELERLHPSEILLPESLALPVILNSFTAPKRLPDWQFDYEHAMQQLTRQFGTRDLNAFGCEELRAAIM AAGALFEYVRLTQHTATDESATQVLGHLQTLRVERPETYLRMDAATRRNLEITLTLRGEEAPTLSSLLDICATSMGSRLL RHWLHHPLRNRITLQQRLDAVSDLIGAKPGILYAGIRERLKHIADIERITSRIALRTARPRDLSGLRDSLTALPEIIKLI TTSTAIAIHRFVPAMEPDTTLTQLLVHALQPVPGAVIREGGVIADGYDAELDELRALQKNCGEFLLQLEARERERTGIPT LKVEYNRVHGFYIEVTRIHGEKIPADYRRRQTLKNAERYSIPELQVFENKTLTAREQALAQEKKLYEQLLEQLADFIIPL QEIARSVAELDVLCAFAERADLFGYTKPVFTDDPALDIEAGRHPVVENQIEQYIANDIQLGAVTREGRQMLIITGPNMGG KSTYMRQTALIILLAHCGSFVPAGSARIGPIDQIFTRIGAADDLAGGRSTFMVEMTEAASILRNATAQSLVLVDEIGRGT STFDGLALAFAIARHLLTQNQSYTLFATHYFELTRLAEEFPQAINVHVTAVEHKRRIVFLHRIEEGSASRSYGLHVAALA GVPDKVIRNAGKILAQLEQEALSKSPQQTLFETIEENAEAAPASAHPVLDYLEQLHPDELTPREALEQLYLIKSMANRIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 6e-175 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Neut_2022 | YP_748210.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 52 |
