Gene Information

Name : Neut_0018 (Neut_0018)
Accession : YP_746275.1
Strain : Nitrosomonas eutropha C91
Genome accession: NC_008344
Putative virulence/resistance : Virulence
Product : two component heavy metal response transcriptional regulator, winged helix family protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 20033 - 20716 bp
Length : 684 bp
Strand : -
Note : TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sde:Sde_1948 response regulator receiver domain protein (CheY-like)

DNA sequence :
ATGAAATTGCTCGTCGTTGAAGATGAGATAAAAACTGGCGAATACGTACGCCAAGGGCTGGTTGAGTCCGGTTTTATAGT
CGATCTGGCCCGTACGGGCCTGGATGGGCACCACCTCGCCCTGACAGAGGACTATGATTTAATCATCCTAGATGTCATGC
TGCCAGATGTTGACGGTTGGCGTATTGTTCAAGCCTTGCGTGAAGCGAAATCGGCGACACCGGTATTGTTTTTGACGGCG
CGCGATAGCGTAGAGGACCGGGTTAAGGGTTTGGAACTAGGCGCCGATGATTATTTGATTAAACCTTTTGCATTTTCGGA
GCTGCTCGCACGAGTGCGTACACTGCTGCGCCGAGGCGCAGCGCCCGCTCTGAGTGATCAATTGCAAGTGGCCGACCTGG
TGCTGGACATTCCACGTCGGCGGGCGAGGCGGCAAGAGGTACGCATTAACCTGACAAACAAAGAATTTGCGCTTCTGGAG
CTTTTGGTGCGCCGCCAAGGTGAGGTGTTACCGCGCTCTCTGATTGCCTCACAGGTGTGGGACATGAATTTTGACAGCGA
CACCAACGTCATTGACGTGGCGATTCGGCGCCTGCGCGCCAAAATCGATGACGCCTTTGAACCCAAGCTGATCCATACCG
TTCGCGGTATGGGATATATGCTTGATGTCAGCAGCGTAGGTTGA

Protein sequence :
MKLLVVEDEIKTGEYVRQGLVESGFIVDLARTGLDGHHLALTEDYDLIILDVMLPDVDGWRIVQALREAKSATPVLFLTA
RDSVEDRVKGLELGADDYLIKPFAFSELLARVRTLLRRGAAPALSDQLQVADLVLDIPRRRARRQEVRINLTNKEFALLE
LLVRRQGEVLPRSLIASQVWDMNFDSDTNVIDVAIRRLRAKIDDAFEPKLIHTVRGMGYMLDVSSVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-60 60
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-59 58

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Neut_0018 YP_746275.1 two component heavy metal response transcriptional regulator, winged helix family protein BAC0083 Protein 2e-72 70
Neut_0018 YP_746275.1 two component heavy metal response transcriptional regulator, winged helix family protein BAC0111 Protein 4e-78 70
Neut_0018 YP_746275.1 two component heavy metal response transcriptional regulator, winged helix family protein BAC0197 Protein 3e-69 68
Neut_0018 YP_746275.1 two component heavy metal response transcriptional regulator, winged helix family protein BAC0638 Protein 2e-64 68
Neut_0018 YP_746275.1 two component heavy metal response transcriptional regulator, winged helix family protein BAC0308 Protein 1e-65 65
Neut_0018 YP_746275.1 two component heavy metal response transcriptional regulator, winged helix family protein BAC0125 Protein 2e-66 64
Neut_0018 YP_746275.1 two component heavy metal response transcriptional regulator, winged helix family protein BAC0347 Protein 5e-68 62
Neut_0018 YP_746275.1 two component heavy metal response transcriptional regulator, winged helix family protein BAC0487 Protein 1e-30 41
Neut_0018 YP_746275.1 two component heavy metal response transcriptional regulator, winged helix family protein HE999704.1.gene1528. Protein 3e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Neut_0018 YP_746275.1 two component heavy metal response transcriptional regulator, winged helix family protein VFG0596 Protein 1e-60 60
Neut_0018 YP_746275.1 two component heavy metal response transcriptional regulator, winged helix family protein VFG1389 Protein 2e-37 47
Neut_0018 YP_746275.1 two component heavy metal response transcriptional regulator, winged helix family protein VFG1390 Protein 2e-41 44