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Name : Neut_0186 (Neut_0186) Accession : YP_746437.1 Strain : Nitrosomonas eutropha C91 Genome accession: NC_008344 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 185958 - 187940 bp Length : 1983 bp Strand : + Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: neu:NE05 DNA sequence : ATGGTTAAAAATTACTTCAGACAGTTTGCACCCTCAGTGTTGACCTTGTCCCGTACGATGAAGCGGCTAATTGCTCTTTC TGTAGATTTCAGTTTGTGTGTTTTGACAGTCTGGCTGGCTTATTACCTGCGTTTGGGTGAGTTTGTCAGTTTTACCAGGC AGGGTCCATGGGCAGAGGGTGCCATTTGGGCAGCGGTAACCTCCGTTGTACTGGCGCTGCCTATTTTTATTGTTACTGGT CTTTATCGTGCCATTTTCAGATACAGCGGTTGGCCGGCGTTATTGACGGTAGCACGTGCTATCAGTATTTATGGGCTGAT CTATGCCACCATCTTTATGGTTATCGGGCTGTCAGGTGTTCCACGCACAATCGGTATCATTCAGCCAATTCTGCTACTCC TGTTTGTCGGTGCATCGCGTGCGCTGGCACGTGTGTGGCTGGGAGATCAGTACCAGAATATTTTGAGACATATTTCCCGG CCCCGGGCATTTATTTATGGTGTTGGCCGAACAGGCCGTCAGTTGGCAGTAGCCATGGCCAATAGTCCGGAAATACAGAT AGCGGGGTTTCTGGATGATGATGATCGCTTGCATGGACATGTACTCAATGGTTTGCCTATCTATAACCCGGGTGATCTGA CGGCCTTGGTTTCCACCTTGAATATCAGCGATGTCTTGTTGGCAATGCCGGGTATTTCACGCCGTCGTCGTAATGAAATT TTATGTCAGATTCGTGATGCGCGTGTTTCGGTACGGACATTGCCCAGTGTGACTGATCTGATCCAGGGTAAGGTGGGTAT TACAGATTTGCGTGAACTGGATATTGATGATCTGCTCGGGCGTGAACCGGTAACACCGAATCATATTCTGTTAGCGAAGA ATATTCTGGGTAAAGTGGTGTTGGTGACGGGAGCGGGTGGATCGATTGGTAGTGAACTTTGCCGCCAGATTCTTGTTGTG GGGCCGATCAGGTTGCTGTTGGTTGAACAGAATGAATTTGCGCTTTATATGATTCACCAGGAACTGGAGGGGAAGCTTGC CAGCCGTGATATTGTGTTGGTGCCTTTATTGGCATCAGTACAGGATGAGGGCCGTATGCGGGAGATCATATCTACTTGGC ACCCGGATACTGTCTATCATACCGCTGCCTATAAGCATGTGCCGCTGGTGGAGCATAATCCGGCGGAAGGCATTAAGAAC AATGTGTTTGGTACGCTCCATCTGGCACGGGCCGCCGAGGAAAATGGTGTGATGGATTTTGTGCTGATCAGCACAGACAA GGCAGTGCGACCTACCAATATCATGGGTGCGAGCAAGCGCCTGGCAGAACTGGTATTACAGGCTCTGGCCGATAACAATT CCACTACCCGATTTTCCATGGTGCGTTTCGGTAATGTGCTGGGTTCATCGGGCTCAGTGGTGCCGAAATTCCGTCAGCAA ATCCGGGAGGGAGGTCCGATTACGCTGACTCATCCGGAGATTACCCGCTATTTCATGACAATTCCGGAAGCGGCTCAATT GGTCATCCAGGCAGGGGCAATGGCCAGGGGCGGGGGGGTATTTGTGCTGGATATGGGAGAATCCGTGAAGATTATGGATC TGGCACGCCACATGATTGAGCTTTCTGGTTTGACTGTCAGAGATGAGCAGAATCTGGAAGGTGACATTGAAATTGAGATT ACCGGTTTGCGCCCCGGTGAAAAGCTTTATGAGGAGCTGTTGATTGGAAACAACCCGGAACTGACCTCCCATCCGAGGAT TATGAGAGCGCATGAAGATTCTGTTCCTTGGGCAGAGCTGGAAGGTAAGCTGAGTGCTTTGGAGATGGCTTTAAATGTGA ATGATGTCGGTGTCATCCGGTTGATGATGGCACAACTGGTTCCTGGTTATATCCCCAATCAGGAGATCGTAGATTGGGTG TATCTTGCGCAGGAAGACGAAGCACGGGCAATGGAGTTGGGCAGCAAGGGGACTTCCGGATAA Protein sequence : MVKNYFRQFAPSVLTLSRTMKRLIALSVDFSLCVLTVWLAYYLRLGEFVSFTRQGPWAEGAIWAAVTSVVLALPIFIVTG LYRAIFRYSGWPALLTVARAISIYGLIYATIFMVIGLSGVPRTIGIIQPILLLLFVGASRALARVWLGDQYQNILRHISR PRAFIYGVGRTGRQLAVAMANSPEIQIAGFLDDDDRLHGHVLNGLPIYNPGDLTALVSTLNISDVLLAMPGISRRRRNEI LCQIRDARVSVRTLPSVTDLIQGKVGITDLRELDIDDLLGREPVTPNHILLAKNILGKVVLVTGAGGSIGSELCRQILVV GPIRLLLVEQNEFALYMIHQELEGKLASRDIVLVPLLASVQDEGRMREIISTWHPDTVYHTAAYKHVPLVEHNPAEGIKN NVFGTLHLARAAEENGVMDFVLISTDKAVRPTNIMGASKRLAELVLQALADNNSTTRFSMVRFGNVLGSSGSVVPKFRQQ IREGGPITLTHPEITRYFMTIPEAAQLVIQAGAMARGGGVFVLDMGESVKIMDLARHMIELSGLTVRDEQNLEGDIEIEI TGLRPGEKLYEELLIGNNPELTSHPRIMRAHEDSVPWAELEGKLSALEMALNVNDVGVIRLMMAQLVPGYIPNQEIVDWV YLAQEDEARAMELGSKGTSG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 6e-84 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Neut_0186 | YP_746437.1 | polysaccharide biosynthesis protein CapD | VFG0029 | Protein | 1e-119 | 49 |
