Gene Information

Name : Neut_1814 (Neut_1814)
Accession : YP_748013.1
Strain : Nitrosomonas eutropha C91
Genome accession: NC_008344
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1924065 - 1924892 bp
Length : 828 bp
Strand : +
Note : PFAM: Integrase, catalytic region; KEGG: lpf:lpl1576 hypothetical protein

DNA sequence :
ATGTGCCGACTCATGGGTGTAAGCCGCAGTGCCTACTATGATTACGTTCGTTGTGCTGACAATTGTTCTACCGACCCGTG
CCATATAGAAATACTTGGAGCAGTACGGGAGATAGCAAAATCCAGTCATCATAGCTATGGCAGTCGCAGAATCGGAAAAG
CGCTGAATGCACGGGGTTATCCGGTTGGTCGCAGGAAGGCTCGAAGCCTGATGCGAGAAGCAGATGTGCAAGTGAGGCAC
CGGAAAAAGTACAAGGTCACAACTAACAGTAATCACAAACAACCGATATTTGAGAATAGGCTGAATCGGCAATTTGATGT
TGCAGCCCCCAATCAAATCTACGTTGGTGACATTACCTGCATTTGGACCCGGGAAGGCTGGTTGTATCTGGCGGTGGTCA
TTGATTTGTTTTCCAGGAAGGTGGTGGGTTGGAGCATGAGTTCAAGAATGAAAGCAAAGCTGGTTTGTGATGCATTGAGA
ATGGCTGTCTGGCAGCGTCAACCACAACCTGGATTGATTGTACATTCAGATCGTGGATCGCAATATGCCAGCAAGCAGTA
CCGCCAACTTTTAAAAATACACGGCTTTATCGGCAGTATGAGTCGTAGGGGAAATTGTTGGGATAATTCAGTGGCTGAAA
GCTTTTTCGGTAGCCTTAAACGGGAGCAAATCCACTGGCAACATTATCCAACCCGCCATAAAGCACAACAAGATGTACTG
CAGTATATTTCCATGTTCTATAACAGCCAGCGACTGCATTCATACCTGGGTTACAAAAACCCGAATCAATATGAGATGGA
AATGGAAATAGTGAAAAATGTTGCTTAA

Protein sequence :
MCRLMGVSRSAYYDYVRCADNCSTDPCHIEILGAVREIAKSSHHSYGSRRIGKALNARGYPVGRRKARSLMREADVQVRH
RKKYKVTTNSNHKQPIFENRLNRQFDVAAPNQIYVGDITCIWTREGWLYLAVVIDLFSRKVVGWSMSSRMKAKLVCDALR
MAVWQRQPQPGLIVHSDRGSQYASKQYRQLLKIHGFIGSMSRRGNCWDNSVAESFFGSLKREQIHWQHYPTRHKAQQDVL
QYISMFYNSQRLHSYLGYKNPNQYEMEMEIVKNVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 8e-34 45
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 8e-34 45
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 1e-44 44
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 1e-44 44
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 1e-44 44
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 9e-42 43
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 2e-42 43
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 1e-42 42
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 6e-31 42
Z5089 NP_290241.1 transposase Not tested LEE Protein 8e-31 42
unnamed CAI43898.1 putative transposase Not tested LEE Protein 2e-31 41
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 2e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Neut_1814 YP_748013.1 integrase catalytic subunit VFG1484 Protein 5e-34 45
Neut_1814 YP_748013.1 integrase catalytic subunit VFG0785 Protein 4e-31 42