Gene Information

Name : Neut_1564 (Neut_1564)
Accession : YP_747773.1
Strain : Nitrosomonas eutropha C91
Genome accession: NC_008344
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, winged helix family protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1639420 - 1640091 bp
Length : 672 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: neu:NE0344 possible response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding

DNA sequence : 
ATGCGTATTCTGGTTGTCGAGGATGATTCCCTGGTGGCAAGCGGTATCAAACAGGGTTTGATCAATGCGGGCTACACTGT
CGATGTGGCGAACACAGCCGGGAGTGCGGAGATCCATCTGCGGGATGAGAATTTTGATCTGGTGGTAGTGGATATCGGCC
TGCCAGATATGGATGGATTAATGCTGGTACAACGACTACGCAACCGGCAGATGCGCCTGCCTGTATTAGTACTAACTGCG
CGCGGTAGCATGGAGGATACGATTGCCGGTCTGGATGTGGGGGCAGATGATTATATGGTCAAGCCATTCCGTTTACCAGA
GCTGGCGGCGCGTATCCGTGCACTGATTCGCCGCGCTCACTCGGTTGCCAGTACCGAGTTACGGCATGATCAGCTGATTC
TCAATACCGGTAGCCACACCGCCACGCTGCACGGCCAGCCACTATTCTTGACCATGCGTGAATGGACTATCCTGGAAATT
CTGTTGATGGCTTCACCCAAAGTAGTTAGCAAAGACAAGCTGCTGCAAAGCCTGGCCGGTTGGGACAAGAACATCACGCC
CAATGCCATTGAAGTTCATGTATCGCGGCTACGCGCCAAGATTGCGCTTGGCGGCATTGGGATTCGCACAGTTCGCGGCA
TCGGTTACCGTATTGATCAGAGCCTCTCATGA

Protein sequence : 
MRILVVEDDSLVASGIKQGLINAGYTVDVANTAGSAEIHLRDENFDLVVVDIGLPDMDGLMLVQRLRNRQMRLPVLVLTA
RGSMEDTIAGLDVGADDYMVKPFRLPELAARIRALIRRAHSVASTELRHDQLILNTGSHTATLHGQPLFLTMREWTILEI
LLMASPKVVSKDKLLQSLAGWDKNITPNAIEVHVSRLRAKIALGGIGIRTVRGIGYRIDQSLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 7e-23 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Neut_1564 YP_747773.1 two component transcriptional regulator, winged helix family protein CP000647.1.gene1136. Protein 2e-23 42
Neut_1564 YP_747773.1 two component transcriptional regulator, winged helix family protein BAC0530 Protein 3e-23 42
Neut_1564 YP_747773.1 two component transcriptional regulator, winged helix family protein BAC0487 Protein 7e-30 41
Neut_1564 YP_747773.1 two component transcriptional regulator, winged helix family protein CP001918.1.gene2526. Protein 1e-22 41
Neut_1564 YP_747773.1 two component transcriptional regulator, winged helix family protein CP001918.1.gene5135. Protein 9e-11 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Neut_1564 YP_747773.1 two component transcriptional regulator, winged helix family protein VFG0473 Protein 1e-33 45