Gene Information

Name : Neut_1362 (Neut_1362)
Accession : YP_747575.1
Strain : Nitrosomonas eutropha C91
Genome accession: NC_008344
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, winged helix family protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1432626 - 1433312 bp
Length : 687 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: neu:NE1409 possible response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain

DNA sequence : 
ATGCGCATTCTGGTTATCGAAGATGAATTCCTTTTGCAAAACCAGATTCGTCAGCAACTGGAAGCAGCAGGTTACATGGT
TGATACTTGCAACAATGGCGAAGAAGGGTTGTTTCTCGCTACGGAATACCGTTTGAATGCCGCCATTATCGATATTGGCC
TGTCCGGTAAATCCGGTCTGGATGTAATCAAGGCACTGCGACAGCGGGGCAGTCTCCTGCCAATTTTGATTCTGACCGCG
CGCAGCAGTTGGCAAGACAAGGTGCGCGGCCTGGAAACGGGTGCGGATGATTACCTGACCAAGCCATTTCAAATGGAAGA
ACTGCAAGCCCGGGTCAAAGCATTATTGCGCCGTGCCAACGGCATCCCGCAGACCTTGCTGGAATGCGGCCCTATCGCGG
TGGATATGACAGCACAACAGGTTTCCATCAATGGTGTAAATATCGAATTAACCTCATTTGAATACCGCTTGCTGGAAGAA
CTGGTGCGTCATCGTGGTGAAGTGCTTTCTAAACAAATACTTGCAGACGCCCTTTATCCACATGACGAAGATCGAGACAG
CAATGTGCTTGAGGTCATGATTGGCAGGTTGCGGCGCAAACTTGATCCCGCTGGTACATTAAAGCCAATTGAAACCATGC
GTGGGCGTGGCTACCGTTTCATACTGGAATGTAATAAATCGGCATGA

Protein sequence : 
MRILVIEDEFLLQNQIRQQLEAAGYMVDTCNNGEEGLFLATEYRLNAAIIDIGLSGKSGLDVIKALRQRGSLLPILILTA
RSSWQDKVRGLETGADDYLTKPFQMEELQARVKALLRRANGIPQTLLECGPIAVDMTAQQVSINGVNIELTSFEYRLLEE
LVRHRGEVLSKQILADALYPHDEDRDSNVLEVMIGRLRRKLDPAGTLKPIETMRGRGYRFILECNKSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 9e-26 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-25 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Neut_1362 YP_747575.1 two component transcriptional regulator, winged helix family protein NC_002516.2.879194.p Protein 1e-58 51
Neut_1362 YP_747575.1 two component transcriptional regulator, winged helix family protein NC_002695.1.913289.p Protein 3e-44 44
Neut_1362 YP_747575.1 two component transcriptional regulator, winged helix family protein CP000034.1.gene2022. Protein 1e-45 44
Neut_1362 YP_747575.1 two component transcriptional regulator, winged helix family protein CP000647.1.gene1136. Protein 3e-46 44
Neut_1362 YP_747575.1 two component transcriptional regulator, winged helix family protein CP001918.1.gene2526. Protein 2e-45 44
Neut_1362 YP_747575.1 two component transcriptional regulator, winged helix family protein CP004022.1.gene1005. Protein 2e-46 44
Neut_1362 YP_747575.1 two component transcriptional regulator, winged helix family protein BAC0083 Protein 2e-30 44
Neut_1362 YP_747575.1 two component transcriptional regulator, winged helix family protein BAC0638 Protein 1e-24 44
Neut_1362 YP_747575.1 two component transcriptional regulator, winged helix family protein BAC0530 Protein 2e-46 44
Neut_1362 YP_747575.1 two component transcriptional regulator, winged helix family protein CP001138.1.gene1939. Protein 3e-46 43
Neut_1362 YP_747575.1 two component transcriptional regulator, winged helix family protein BAC0308 Protein 4e-29 43
Neut_1362 YP_747575.1 two component transcriptional regulator, winged helix family protein BAC0347 Protein 2e-30 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Neut_1362 YP_747575.1 two component transcriptional regulator, winged helix family protein VFG0475 Protein 3e-46 43
Neut_1362 YP_747575.1 two component transcriptional regulator, winged helix family protein VFG1389 Protein 1e-31 43
Neut_1362 YP_747575.1 two component transcriptional regulator, winged helix family protein VFG0596 Protein 4e-26 42