Gene Information

Name : Neut_1342 (Neut_1342)
Accession : YP_747557.1
Strain : Nitrosomonas eutropha C91
Genome accession: NC_008344
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1409357 - 1410028 bp
Length : 672 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: neu:NE0827 ATPase component ABC-type (unclassified) transport system

DNA sequence : 
ATGATACAGCTCCAGGGTATCACCCGGATTTTTCATATGGGGGATCAAGCTATCCATGCACTTGACCATATTGATCTGAC
AATCGACTCTGGTGAATATGTTTCCATCATGGGGCCTTCCGGATCGGGCAAATCAACCCTGCTGAATGTTATCGGTTTAC
TCGACCGGCCGGACAGCGGGCATTATCTACTGGATGGCAGAGACGTCACCGCACTGTCGGAAACCGAGCAAGCACAAGTT
CGCCGGGAAAAAATTGGTTTTGTTTTCCAATCTTTCCATCTGATCCCGCGTTTGACGGCTGCAGAAAACATTGAAATTCC
TCTGATACTGACTGGCATGCCTTCAATAGAGCGTAAGGAGCGCATCGCAGAAACCTTGCAGGCATTCAACTTGAGTGATC
GTGCACACCACCGACCGGCTGAACTATCTGGCGGGCAGCGCCAGCGGGTGGCCATTGCCCGCGCAACGATCTTGCGTCCT
ACTGCATTGCTGGCGGATGAACCCACCGGCAATCTTGATCATCGTATCGGCTCAGAAGTAGCAACGTTGCTGGAAGCATT
GAATCAAACAGGTACCACGCTTATCGTCGTAACGCATGATCGCGAACTGGCATTACGCGCCCGGCGCCGGGTTGCCATGC
ACGATGGTCGGATCGAAACCGACGAACAATGA

Protein sequence : 
MIQLQGITRIFHMGDQAIHALDHIDLTIDSGEYVSIMGPSGSGKSTLLNVIGLLDRPDSGHYLLDGRDVTALSETEQAQV
RREKIGFVFQSFHLIPRLTAAENIEIPLILTGMPSIERKERIAETLQAFNLSDRAHHRPAELSGGQRQRVAIARATILRP
TALLADEPTGNLDHRIGSEVATLLEALNQTGTTLIVVTHDRELALRARRRVAMHDGRIETDEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-32 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-32 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Neut_1342 YP_747557.1 ABC transporter-like protein NC_008702.1.4606598. Protein 2e-65 68
Neut_1342 YP_747557.1 ABC transporter-like protein NC_012469.1.7686878. Protein 6e-53 50
Neut_1342 YP_747557.1 ABC transporter-like protein CP001581.1.gene798.p Protein 4e-39 46
Neut_1342 YP_747557.1 ABC transporter-like protein NC_012469.1.7686946. Protein 1e-26 41