Gene Information

Name : Neut_0012 (Neut_0012)
Accession : YP_746270.1
Strain : Nitrosomonas eutropha C91
Genome accession: NC_008344
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 13786 - 14109 bp
Length : 324 bp
Strand : +
Note : PFAM: transposase IS3/IS911 family protein; KEGG: neu:NE0749 transposase IS911 HTH and LZ region

DNA sequence : 
ATGAGCAAGCAGAACAAGTTTTCGCCGGAAGTCCGTGAACGCGCCGTGCGCCTGGTGCAGGAGCATCGTGGCGAGTATCC
GTCGCTGTGGGCGGCCGTCGAGTCCATTGCGCCGAAGATCGGCTGCGTGCCGGCCACGCTGCTGGACTGGGTCAAGCGCA
GCGAGATCGACAGCGGCAAGCGTGACGGCATGACTACCAGCGAACGCGAACGCATGAAGGCGCTGGAACGAGAGAACAAA
GAACTGCGCCGGGCCAACGAGATACTGAAGTCGGCCAGTGCTTTTTTCGCCCAGGCGGCGCTCGACCGCGAACTGAAGAA
GTAA

Protein sequence : 
MSKQNKFSPEVRERAVRLVQEHRGEYPSLWAAVESIAPKIGCVPATLLDWVKRSEIDSGKRDGMTTSERERMKALERENK
ELRRANEILKSASAFFAQAALDRELKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1639 NP_287142.1 hypothetical protein Not tested TAI Protein 9e-27 63
Z1661 NP_287163.1 hypothetical protein Not tested TAI Protein 9e-27 63
Z1199 NP_286734.1 hypothetical protein Not tested TAI Protein 9e-27 63
Z1222 NP_286757.1 hypothetical protein Not tested TAI Protein 9e-27 63
IS629 CAC37925.1 hypothetical protein Not tested LEE Protein 2e-26 61
IS629 CAI43820.1 hypothetical protein Not tested LEE Protein 2e-26 61
IS629 CAI43841.1 hypothetical protein Not tested LEE Protein 2e-26 61
IS629 CAI43908.1 hypothetical protein 1 Not tested LEE Protein 2e-26 61
ECO103_3584 YP_003223442.1 IS629 transposase OrfA Not tested LEE Protein 3e-26 61
unnamed AAF09023.1 unknown Not tested SHI-O Protein 2e-23 60
tnpE AAD44738.1 TnpE Not tested SHI-2 Protein 2e-23 60
unnamed CAD42084.1 hypothetical protein Not tested PAI II 536 Protein 1e-22 60
S3184 NP_838467.1 IS629 orfA Not tested SHI-1 Protein 7e-23 59
SF2979 NP_708753.1 IS629 ORF1 Not tested SHI-1 Protein 7e-23 59
ECO111_3720 YP_003236060.1 putative IS629 transposase OrfA Not tested LEE Protein 2e-24 59
ECO111_3775 YP_003236110.1 putative IS629 transposase OrfA Not tested LEE Protein 2e-24 59
APECO1_3498 YP_854313.1 transposase; OrfA protein of insertion sequence IS629 Not tested PAI I APEC-O1 Protein 2e-21 59
ORF_36 AAZ04445.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-21 59
Z4335 NP_289560.1 hypothetical protein Not tested OI-122 Protein 2e-24 59
SF3706 NP_709445.1 IS629 ORF1 Not tested SHI-2 Protein 2e-22 59
unnamed AAL67399.1 TnpE-like protein Not tested PAI II CFT073 Protein 5e-23 59
c5168 NP_757016.1 hypothetical protein Not tested PAI II CFT073 Protein 7e-23 59
unnamed ADD91740.1 hypothetical protein Not tested PAI-I AL862 Protein 5e-23 59
c5214 NP_757062.1 hypothetical protein Not tested PAI II CFT073 Protein 7e-23 59
S4062 NP_839231.1 IS629 orfA Not tested SHI-2 Protein 1e-21 59
c3596 NP_755471.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-20 57
c5177 NP_757025.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-20 57
r13 AAC61722.1 R13 Not tested PAI I CFT073 Protein 9e-21 57
ECUMN_3344 YP_002414020.1 transposase ORF A, IS629 Not tested Not named Protein 1e-20 57
unnamed AAL67404.1 R13-like protein Not tested PAI II CFT073 Protein 9e-21 57
CDCE8392_1959 YP_005134490.1 hypothetical protein Not tested Not named Protein 7e-12 46
CDC7B_2036 YP_005163477.1 hypothetical protein Not tested Not named Protein 7e-11 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Neut_0012 YP_746270.1 transposase IS3/IS911 family protein VFG1603 Protein 5e-23 60
Neut_0012 YP_746270.1 transposase IS3/IS911 family protein VFG0606 Protein 6e-23 59
Neut_0012 YP_746270.1 transposase IS3/IS911 family protein VFG0643 Protein 2e-23 59
Neut_0012 YP_746270.1 transposase IS3/IS911 family protein VFG1717 Protein 4e-21 57