Gene Information

Name : Neut_1091 (Neut_1091)
Accession : YP_747311.1
Strain : Nitrosomonas eutropha C91
Genome accession: NC_008344
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 1130595 - 1131698 bp
Length : 1104 bp
Strand : +
Note : KEGG: neu:NE0793 riboflavin biosynthesis bifunctional RibD; TIGRFAM: riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase-like; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein

DNA sequence :
ATGATAAAACAAGTGTTTACTGCTTCAGATTATATGCACATGTCGCATGCCTTACAGTTGGCAGAAAGAGGGTTGTTTAC
CACAAGCCCGAATCCGCGTGTAGGGTGTGTGATTGTAAATGATGGCAAGGTAGTCGGAACTGGATGGCATGAGCGGGTGG
GGGAATCGCATGCAGAAATCAATGCGTTGCGGGAAGCGGGGGATTTGGCCAGAGGTGCTACAGTTTACGTAACACTGGAA
CCTTGCAGTCATCATGGTCGTACACCGCCATGCGTTGAAGCTTTGATTTGCGCTGAGGTATGCAGAGTGATTATGGCAAT
GGATGACCCTAATCCTCATGTAAACGGTCAAGGAAAGGAGAAGCTGCAGAAAGCCGGAGTTGAAGTGCAAACAGGCTTGT
TGGAGGATGAAGCACAGCAACTGAATATTGGATTTATTACCCGGATGCACCATAGCCGACCGTGGATACGAACTAAGATA
GCGGCCAGCCTGGATGGCAGGATTGCATTGAAAAATGGGAAAAGCCAGTGGATTACAGGCGAGCCAGCTCGACAGGATGG
CCATAGGTGGCGTGCCCGTTCATGTGCAATATTAACGGGAGTCAATTCAGTAAAGGTGGATGATCCACTGTTGACAGTAC
GATATATCGAGACTTCGAGGCAACCCATACGTATCGTTCTGGATTCGAATCTGGAAATTCCTCTACAGGCAAAACTGCTG
GAAAATGCTGATACAACCTGGATTTTTACGGTGCAGGCTGACAGGGGAAAAATACATCTTCTGGAGGATGCGGGTGCTCA
TGTCGTTGTTCTGCCTGATCTGGCAGGTAAAGTTGATCTTAAAGCAATGATAACGAAACTGGCCGAATTGGGTATCAATG
AGCTGCTGGTTGAAGCAGGTCCAGTGTTGAACGGGGCGTTGGTAGCAGCCGAATTGATAGATGAGATTATTTTTTATTTT
GCCCCTAACCTGTTGGGTAATTCGGCGCAAGCAATGCTGGTACTACCCGAAATTACAGATTTATCAGAGAAATATAATTT
ACAGATAACTGATATTCGGAAAATCGGAATAGATATCCGTCTGGTAGCAAGATTTATCAAATAA

Protein sequence :
MIKQVFTASDYMHMSHALQLAERGLFTTSPNPRVGCVIVNDGKVVGTGWHERVGESHAEINALREAGDLARGATVYVTLE
PCSHHGRTPPCVEALICAEVCRVIMAMDDPNPHVNGQGKEKLQKAGVEVQTGLLEDEAQQLNIGFITRMHHSRPWIRTKI
AASLDGRIALKNGKSQWITGEPARQDGHRWRARSCAILTGVNSVKVDDPLLTVRYIETSRQPIRIVLDSNLEIPLQAKLL
ENADTTWIFTVQADRGKIHLLEDAGAHVVVLPDLAGKVDLKAMITKLAELGINELLVEAGPVLNGALVAAELIDEIIFYF
APNLLGNSAQAMLVLPEITDLSEKYNLQITDIRKIGIDIRLVARFIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 3e-61 45
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 3e-61 45