Gene Information

Name : GbCGDNIH1_0363 (GbCGDNIH1_0363)
Accession : YP_744184.1
Strain : Granulibacter bethesdensis CGDNIH1
Genome accession: NC_008343
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 412601 - 414118 bp
Length : 1518 bp
Strand : -
Note : -

DNA sequence :
TTGAGTATCAGACGGGTGGTGACAAACTCAGTCACCACCCGTCCCGCCAACCACCGTTGCAAAAAACTACGCCGGATCAA
ATCAATGGCCATTCGCTCCCGTCTCCGCCGCCAGCGGCGCACCAAGATCGTCGCGACCATTGGACCGGCCAGCTCCTCGC
CCGAGATGCTGGCCCGCCTGTTTCAGGCCGGGGCCGATGTATTCCGCATCAATTTCAGCCACGGCTCCCACAGCGATCAC
GCCGAGCGCATCCGTGCGATCCGGGAGCTGGAAGCCGAAATGCGCCGCCCCATCGGTATTCTGGCAGACGTACAGGGGCC
AAAGCTTCGTGTCGGCATGTTCGGCGGTGGCAGGGCACATCTTCAGACGGGACAGAAATTCCGCCTCGATCTCAGCCCGA
CCCCCGGGGATCGCGAACGGGTGCAGCTGCCCCACAAGGAAATTATCGAGGCTGCGACCTACGGCACCACCCTGCTGCTG
GATGACGGCAAGCTGCGGCTGCATGTGGACCGCAACCGGGGTGATCATCTGGAATGCACCGTGCTGGTCGGCGGTCCGCT
CTCCGACCGCAAGGGTGTGAACGTGCCGGATGTGGTGCTGCCGATTCCCGCCCTGACCGAGAAAGACCGCGCCGATCTCG
CTTTCGCACTGGACCATGGGGTGGACTATATCGGCCTCTCCTTTGTGCAGCGGGTCGAGGATGTGCTGGAAGCGCGCGCC
CTGATTGGCGACCGGGCCTGGATCATGACAAAAATGGAAAAGCCGCAGGCGCTGGAAAACCTCGAAGGCATTCTGGAAGC
CTCCGACGCCGTGATGGTGGCGCGTGGCGATCTGGGCGTTGAACTGCCGCCGGAAGAAGTGCCGCTGGCGCAGAAAAACA
TCATCCGCGCCGCCCGGAAACTGGGCCTGCCCGTGGTCGTGGCAACACAGATGCTGGAAAGCATGATCAATGCGCCCGCC
CCGACCCGCGCCGAAGCCTCCGACGTCGCCACTGCCGTGTTTGATGGGGCGGACGCGGTGATGCTCTCGGCGGAGACCGC
CGCCGGACAATTTCCGTATGAAGCCGTCAACATCATGGACCGCATCGTTGCCCGCGTGGAGCGCGACGCGGGCTGGCGTG
CCATTACCGACTCCAACCGCCCCGCGCCCGAGCCGAAAACCGCCGATGCCATTGCCACCGCGGCCCGGCAGATTGCACAG
ACCATTCAGGCCCGCGCCATCGCCGCCTACACCGCCAGTGGACGCACCGCCCTGCGCGTAGCCCGGGAGCGCCCGGAATG
CCCGGTGATCGGCCTGACGACCGAGGAAAACACGGCCCGTCGTCTGGCCGTAGCCTGGGGAGTCCATGCGGTGGTCACAC
CCCCCACCCAATCCATGACCGATACGGTCAGCCGTGCCATACGGCATGCGCAGTCGGAAGGATTTGCCTCCGTTGGCGAG
GAAATCGTGGTGACCGCCGGTATTCCGTTGGGTCTGAAGGGCGGCACCAACGCAATCCGGGTTGCTTCCGTTATTTGA

Protein sequence :
MSIRRVVTNSVTTRPANHRCKKLRRIKSMAIRSRLRRQRRTKIVATIGPASSSPEMLARLFQAGADVFRINFSHGSHSDH
AERIRAIRELEAEMRRPIGILADVQGPKLRVGMFGGGRAHLQTGQKFRLDLSPTPGDRERVQLPHKEIIEAATYGTTLLL
DDGKLRLHVDRNRGDHLECTVLVGGPLSDRKGVNVPDVVLPIPALTEKDRADLAFALDHGVDYIGLSFVQRVEDVLEARA
LIGDRAWIMTKMEKPQALENLEGILEASDAVMVARGDLGVELPPEEVPLAQKNIIRAARKLGLPVVVATQMLESMINAPA
PTRAEASDVATAVFDGADAVMLSAETAAGQFPYEAVNIMDRIVARVERDAGWRAITDSNRPAPEPKTADAIATAARQIAQ
TIQARAIAAYTASGRTALRVARERPECPVIGLTTEENTARRLAVAWGVHAVVTPPTQSMTDTVSRAIRHAQSEGFASVGE
EIVVTAGIPLGLKGGTNAIRVASVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 5e-63 42
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 5e-63 42
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 4e-63 42
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 2e-62 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GbCGDNIH1_0363 YP_744184.1 pyruvate kinase VFG0479 Protein 2e-63 42