Gene Information

Name : GbCGDNIH1_2376 (GbCGDNIH1_2376)
Accession : YP_746197.1
Strain : Granulibacter bethesdensis CGDNIH1
Genome accession: NC_008343
Putative virulence/resistance : Virulence
Product : aerobactin siderophore biosynthesis protein iucC
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4264
EC number : 6.-.-.-
Position : 2641318 - 2643204 bp
Length : 1887 bp
Strand : -
Note : -

DNA sequence : 
GTGCATCAGATGATTGTATCGAATGAATTCAACGTGATGCGTGATCGTCAGGATACTCTACGCCATGCCTCCTTGCATGC
TTCCCTGTGGCGACGTGTCAATCTGACCTGTCTTGCAAAATCCCTGTCTGAGCTTGCCTATGAGGAAGCATTTCATCCCG
AGGAAGAAGCAGGCGGATTATGGATATTCCGCTTTGGTGATGTTCATTACCGATGTGAAGGGGAGCCGCGCATCTGGGGG
CAGCTGACAATTGACCCTGATAGTATCATCAGGATTGAAAACGGCGAGGAAAGTCAGGCCCACGATGCTGCACAGTTTTT
TGTGGATGCACAGGCTGCACTGGGTATGAGTGATGCAACACTGGCAATGTATCTGCAGGAGCTTTACGCCACGCTGCAAA
CAGATATGGAACTGCTGAGAAGGCGGGATGGTCTGTCTGCAATTTCCATGCTTGATCTCGACAATGATCGCTTGCAGGCC
AGACTGGATGGGCATCCCAAAGCTCCGGCCTCGAAAGGCAGGGTTGGCTGGGGATTGGAAGATCAGCGCGCCTATGCACC
TGAATATGATCCTGTGTTCCGCCTGCACTGGATTGCTGTGGCGCGTGAAGCCTGTTTGGGTGGCATGACGCGTGATATCA
GTGAAGATGATCTTTTGTCGGAAATGCTGCGTGTCGATGATCTGCGGCAGATCGATCGTATTCTGTTCGAGCGAGGATTC
GACAGGATCAGTCATCGGCTGATTCCCGTGCATCCATGGCAGTGGCAGAATTATATTCAGACGCATTTTGCAGCTGATAT
TGCATCAGGCAGGATTGTACCACTGGGTGAACGGGGTGATCTCTATCGACCACAGCAATCCCTACGGACGTTGGCCAATG
CGGAAAGAGCGGCGGCGCATGATATCAAACTGCCGGTCACCATTCTGAATACGTCTGCATGGCGCGGCCTGCCTGGTAAA
GGCATTTTGACCGGTGTCGGCCTGTCATCATGGCTGAGCGAATGTGTCGCGAAAGATGCTGTTTTCCAGACTACGAAAGT
CCTGATCCTTCGGGATATGGCCGGTTATGCAGTGCCGCAAACTGTATATGGAAAAATTGCTCAGGCTCCCTACCGCTTTC
ATGAATTACTGGGCGCCGTATGGCGACAGCGCGCGGAGCCATCACTGGCAGAGGATGAGCGTGCCATCATGCTGGGAGCA
TTACAGGTATGTGGCGGGGATGGCGTACCGTTGATCTCGGCCTGTATCCGTCGTTCTTCCATGCCGTGCGATATCTGGCT
GGAGAGGTTGTTTTCTTCTGTCGTGGTCCCGCTCTATCACCTGATGTGCCGGTATGGCGCCGGGTTTATCGCCCATGGAC
AGAATGTTACGCTGTTATTGAAAGACTGGGTGCCCTGTGGTGTGGCGCTGAAGGATTTGCAGGGGGATTTCGATCTCGTC
ACGCCTGTCTTGCCGGAGCATGAGACTTTGCCCGAAGGATTGGCTGATCAGGTTGGCAGGCGTCCGGCTGAGCATCTGAT
TCATCACCTTCAGACGGGCCATTTTGTCAGCGTCCTCCGATTTCTGTCGGATGCTTTGCTGACGCATGACGGATATCCCG
AGCAGGCTTTTTATCAGGGTCTCGCCCGTGTCATCCGTCAATATCAGGCACGCTGTCCGGAATTGGCGGGGCGTTTTGAG
ATGTTTGATCTTTTTACCCCGACCATGATGCGTATCTGCATCAACCGTGCCCGGTTCTCCATCGGGTATGGCGATACGCC
GGTAAGGCCGAAACCTGAAATTGGAACGCCTCTCCATAATCCTCTTTATGATGACTGGTCACTTCGCAGCGATTGGAATC
ATTCCTTACACCAACATGCAGCTTTTCAGTCTGGGAGTATGGCCTGA

Protein sequence : 
MHQMIVSNEFNVMRDRQDTLRHASLHASLWRRVNLTCLAKSLSELAYEEAFHPEEEAGGLWIFRFGDVHYRCEGEPRIWG
QLTIDPDSIIRIENGEESQAHDAAQFFVDAQAALGMSDATLAMYLQELYATLQTDMELLRRRDGLSAISMLDLDNDRLQA
RLDGHPKAPASKGRVGWGLEDQRAYAPEYDPVFRLHWIAVAREACLGGMTRDISEDDLLSEMLRVDDLRQIDRILFERGF
DRISHRLIPVHPWQWQNYIQTHFAADIASGRIVPLGERGDLYRPQQSLRTLANAERAAAHDIKLPVTILNTSAWRGLPGK
GILTGVGLSSWLSECVAKDAVFQTTKVLILRDMAGYAVPQTVYGKIAQAPYRFHELLGAVWRQRAEPSLAEDERAIMLGA
LQVCGGDGVPLISACIRRSSMPCDIWLERLFSSVVVPLYHLMCRYGAGFIAHGQNVTLLLKDWVPCGVALKDLQGDFDLV
TPVLPEHETLPEGLADQVGRRPAEHLIHHLQTGHFVSVLRFLSDALLTHDGYPEQAFYQGLARVIRQYQARCPELAGRFE
MFDLFTPTMMRICINRARFSIGYGDTPVRPKPEIGTPLHNPLYDDWSLRSDWNHSLHQHAAFQSGSMA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucC AAK71633.1 IucC Virulence SHI-3 Protein 1e-101 44
iucC NP_839221.1 siderophore biosynthesis protein Virulence SHI-2 Protein 7e-102 44
iucC NP_709456.1 siderophore biosynthesis protein Virulence SHI-2 Protein 7e-102 44
iucC YP_002414044.1 Aerobactin siderophore biosynthesis protein Virulence Not named Protein 3e-102 44
iucC AAD44748.1 IucC Virulence SHI-2 Protein 1e-101 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GbCGDNIH1_2376 YP_746197.1 aerobactin siderophore biosynthesis protein iucC VFG0938 Protein 1e-102 44
GbCGDNIH1_2376 YP_746197.1 aerobactin siderophore biosynthesis protein iucC VFG0617 Protein 3e-102 44
GbCGDNIH1_2376 YP_746197.1 aerobactin siderophore biosynthesis protein iucC VFG1083 Protein 6e-102 44