Gene Information

Name : GbCGDNIH1_0239 (GbCGDNIH1_0239)
Accession : YP_744060.1
Strain : Granulibacter bethesdensis CGDNIH1
Genome accession: NC_008343
Putative virulence/resistance : Unknown
Product : serine palmitoyltransferase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0156
EC number : 2.3.1.50
Position : 282482 - 283681 bp
Length : 1200 bp
Strand : -
Note : -

DNA sequence :
ATGAGCTGTTCCATTCTCGCCAAATTTGCTCCCCTCGCCGAAGCGCGGCGCGCCCTGACCTCCGCCGGTCATGATCCGTT
CAGCGTGGTGATCGAGCCAGGCCCCTCGGCCAGTGAAGGCATGATCAATGGACAGCCGACCCTGCTGTTCGGAACCAACA
ACTATCTGGGTCTCAATCTGGACCCGGCCGGGATAAGCGCTTCCGCCGAGGCCGTGCGGGAGCATGGAACCGGCACCACC
GGCTCCCGTATCGCCAATGGCACCACAGCACTGCACACCGCCCTGGAACACGAGCTGGCTGCGTTCTATGGTCGCAAACA
TGCCATGGTGTTCAGCACCGGCTATCAGGCCAATCTCGGCATTCTCTCTACACTGGCCGGCAAGGATGACTATCTGCTGC
TGGATGCTGACAGCCATGCCAGCATCTATGATGGCAGCCGCCTTGGTCAGGCGCAGGTGATCCGTTTCCGTCACAACGAT
CCGGAAGATCTGGCCCGCCGCCTGCGCCGTCTGGATGGCACACCGGGCGCAAAGCTGGTGGTGGTCGAAGGTATTTACTC
CATGCTCGGCGACAGCTGTCCCCTTGCCGAGATTGCCGCTGTCAAACGCGAAGCGGGTGCATGGCTGCTGGTGGATGAAG
CCCATTCGCTCGGGGTGCTCGGTGCCCGTGGGCGTGGGCTTGCGGAAGCTCAAAACGTAGAGGCCGATACCGATTTCATC
GTCGGCACATTTTCGAAAAGTCTCGGCAGTGTCGGCGGTTTCTGCGTGACCGACATAGACGGCTTCGACATTCTGCGCGT
TGCCTGCCGCCCTTATATGTTTACCGCTTCACTGCCAGCCTCCGTGATTGCCTCCGTGCAATCCGCTCTACGGCAGATGC
AGCAAAGGCCGGACTTGCAGGCAACGCTGCGACACAATGCCGAAGCACTTCATGGCGGGCTGAAACAGGCCGGTTTCACA
GTGGGACCACAGGTCAGCCCCATCGTGGCGGTCACGATGCCGGATATTCCCACCGCCATCGCTTTCTGGAATGCGCTGCT
GGAGCATGGAGTGTATGTCAATCTGTCCTTACCGCCCGCAACGCCGGATGATCATCCTCTGCTGCGTTCCAGCGTGACGG
CCAGCCATACAGAAGGAATGATCAACGACGCTATCGCTCGTTTCAAAGTAGCGGCTTCCGATATCGGTTTTCCGCTCTGA

Protein sequence :
MSCSILAKFAPLAEARRALTSAGHDPFSVVIEPGPSASEGMINGQPTLLFGTNNYLGLNLDPAGISASAEAVREHGTGTT
GSRIANGTTALHTALEHELAAFYGRKHAMVFSTGYQANLGILSTLAGKDDYLLLDADSHASIYDGSRLGQAQVIRFRHND
PEDLARRLRRLDGTPGAKLVVVEGIYSMLGDSCPLAEIAAVKREAGAWLLVDEAHSLGVLGARGRGLAEAQNVEADTDFI
VGTFSKSLGSVGGFCVTDIDGFDILRVACRPYMFTASLPASVIASVQSALRQMQQRPDLQATLRHNAEALHGGLKQAGFT
VGPQVSPIVAVTMPDIPTAIAFWNALLEHGVYVNLSLPPATPDDHPLLRSSVTASHTEGMINDAIARFKVAASDIGFPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAE85251.1 hypothetical protein Not tested PAI V 536 Protein 1e-79 51