Gene Information

Name : hslU (GbCGDNIH1_2237)
Accession : YP_746058.1
Strain : Granulibacter bethesdensis CGDNIH1
Genome accession: NC_008343
Putative virulence/resistance : Unknown
Product : ATP-dependent protease ATP-binding subunit HslU
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG1220
EC number : -
Position : 2485901 - 2487217 bp
Length : 1317 bp
Strand : +
Note : heat shock protein involved in degradation of misfolded proteins

DNA sequence :
ATGGACATCCCTACCTATTCACCCCGCGAAATCGTCTCCGAACTGGATCGCTTCATCGTCGGTCAGACCGATGCCAAACG
GGCCGTGGCCATTGCCCTGCGTAATCGCTGGCGCAGGCAGCAACTGCCGGAAGCGATGCGGGAAGAAGTCGTCCCCAAGA
ATATTCTGATGATCGGCCCCACCGGCTGCGGCAAGACCGAAATCGCCCGCCGTCTGGCCAAACTGGCGCAAGCCCCGTTC
CTGAAGGTCGAGGCCACCAAATTTACCGAAGTCGGTTACGTGGGCCGCGACGTCGAAAGCATCGTGCGCGATCTGGTCGA
GGCCTCACTGACCATGCTGCGCGATACCAGCCGCCGGAATGTGCAGGCGCAGGCGGAACTGGCCGCCGAAGAACGGCTGC
TCACCGCGCTGGTCGGTGAAGGGGCTGCCGCCGATACGCGTTCCCATTTCCGGCGCATGCTGCGCAATGGGGAGCTGGAA
GAAAAAGAAATCGAGATTTCCATTGCCGCCGCTCCTTCCGCACCGCCATCGGTCGATATCCCCGGCGTCCCGCCCGGTCA
GGCGATCAATCTGACCGAGATGATGAAGGGCATGTTCGGCAATCGCCAGCAGCAGAAGAAACTCACCGTTGCCGCGGCAC
GGGAGCTGCTTCAGCGCGAGGAAGCCGATCGGCTGCTGGATAATGACAAGCTCGGGCGCGATGCGGTGGAGCATGCCGAA
AACAACGGCATCGTCTTCATCGATGAGATCGACAAGGTTTGCGCCCGCAGCACTGAAGGCGGCATGCGCGGCGGCGATAT
CTCCCGCGAGGGCGTGCAGCGCGATCTGTTGCCGATCATCGAAGGCACCACCGTGAACACCAAATATGGTCCGGTGAAAA
CCGACCATATCCTGTTCATCGCCTCCGGCGCGTTTCATCTGGCCAAGCCGTCAGACCTGCTGCCGGAACTTCAGGGCCGC
CTGCCGATCCGGGTGGAACTGCAACCCCTGTCACGTGCCGATATGCGCCGGATTCTGGTGGAACCCGAGCACTCCCTGCT
GAAACAGTATCAGGCTCTGCTGGGGACCGAGCAGGTCGATCTGGACATCACCGACGATGCGATCGACGCGCTGGCCGATC
TGGCGGCGGAGATCAATGACCGGGTCGAGAATATCGGTGCCCGGCGCCTGCATACGGTGTTGGAGAAACTGCTGGAAGAT
ATCAGCTTTACCGCCGCCGATCGTGCGGGGGAACTGGTCACCGTCGATGCGGCTCTGGTCAGGGACCGCGTGGCTCCGCT
GGCGGGCAAGGCCGATCTCAGCCGCTTTATTCTGTGA

Protein sequence :
MDIPTYSPREIVSELDRFIVGQTDAKRAVAIALRNRWRRQQLPEAMREEVVPKNILMIGPTGCGKTEIARRLAKLAQAPF
LKVEATKFTEVGYVGRDVESIVRDLVEASLTMLRDTSRRNVQAQAELAAEERLLTALVGEGAAADTRSHFRRMLRNGELE
EKEIEISIAAAPSAPPSVDIPGVPPGQAINLTEMMKGMFGNRQQQKKLTVAAARELLQREEADRLLDNDKLGRDAVEHAE
NNGIVFIDEIDKVCARSTEGGMRGGDISREGVQRDLLPIIEGTTVNTKYGPVKTDHILFIASGAFHLAKPSDLLPELQGR
LPIRVELQPLSRADMRRILVEPEHSLLKQYQALLGTEQVDLDITDDAIDALADLAAEINDRVENIGARRLHTVLEKLLED
ISFTAADRAGELVTVDAALVRDRVAPLAGKADLSRFIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslU YP_003728753.1 heat shock protein HslU Not tested cag PAI Protein 7e-82 47