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Name : GbCGDNIH1_1987 (GbCGDNIH1_1987) Accession : YP_745808.1 Strain : Granulibacter bethesdensis CGDNIH1 Genome accession: NC_008343 Putative virulence/resistance : Unknown Product : oligopeptide transport ATP-binding protein oppF Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 2230509 - 2232122 bp Length : 1614 bp Strand : - Note : - DNA sequence : ATGAGACCGTCACACGATTCGCATCCTGACACCCCCGCACAGACCCTGCTGGAGATTGCCGATCTATCGGTGCGGTTTGC GACGAGGGAGGTGGTCAGGCGCGTCTCTTTCTCGGTTCGGCGTGGTGAGACACTGGCGCTGGTAGGAGAGTCCGGCTCCG GCAAGTCGCTGACCGCGTTGTCGATCCTGCAACTTCTGCCGGATGGGGCGCTGTGCTCCGGCCGGATCGCGCTGGATGGC GTGCCGATGATCGGAGCCGCCCCGGCGGTCTTGCGGCAGATGCGCGGTGGCGTGGCCGGGATGATCTTTCAGGAGCCGAT GACGAGCCTGAATCCGCTTCACCGGATCGGGCGACAAGTGGGCGAGGCTCTGGCGCTGCATGGCCGCAAGCCGGATAAGG CGGCGGTCGCACATCTGCTGCGTCAGGCCGGTTTCGCGGATGCGGAAACGCGTCTGCATGCTTTTCCGCATCAGCTTTCA GGGGGGCAACGCCAGCGCGTCATGATTGCGATGGCGCTGGCCAACGATCCGGCTCTGCTGATTGCCGATGAGCCGACCAC TGCGCTGGATGTCACGATTCAGGCCCAGATCCTCGATCTGCTGGCGGAGCAGAAACGGGCGCGTCAGCTGGGTCTGCTGT TGATCACCCATGACCTCACCGTTGTGCGCCGCCACGCCGACCGTGTCTGCGTCATGCGGCATGGAGAGATCGTCGAGCAG GGAGCGGTGAAGGATGTATTTTCCACCCCTGCCCATCCCTACACCAGGATGCTGCTGGATGCGGAGCCAACGGGGACGGC CTCTCCCTTGCCGGGGTCACCGCCGGGACTGGCATCGGCGCGCAATCTGAAAGTGTATTTCCCGATCCGTGGCGGTCTGT TGCGGCGTGTTACCGGGCAGGTCAGGGCGGTAGATGACGTGACACTGACGGTGCGGGAAGGTGAAACGCTCGGGCTGGTC GGAGAATCCGGGTCGGGCAAATCGACCATTGGTCAGGCTCTGCTGCGTCTGCAACCTTCGGAAGGGGTGATCCGCTTTGC CGGGCATGATCTGCAGGGGTTGGGGGAACGCAGCTTGCGCCCGTTGCGACGCGATATGCAGATCGTGTTTCAGGATCCGT TCGGCAGTCTCTCCCCCCGGATGAGTGTGCGGGAGATCATCGGTGAAGGTCTGGCCGTGCATGAACCCCATCAGAAACGC ACAGAGCGGGAAGCACGGGTTGCGCGGGCGCTGGAAGAAGTCGGCCTGCCGAAAGACGCGGCGGAACGCTATCCGCATGA ATTCAGCGGCGGCCAGCGCCAGCGTATCGCCATTGCCCGTGCGTTGGTGTTGCAGCCGCGCTTCATCGTGCTGGATGAGC CGACCAGTGCTCTGGATATGTCCGTGCAGGCGCAGATCGTCACCCTGCTGCGCGGATTACAGGCCCGCTACGGCATGGGA TATCTGTTTATCAGCCATGATTTGCGTGTTGTGCGCGCCCTTGCGCACCGTGTTGCGGTTCTGCGACGCGGCGTTGTGGT CGAGGAAGGGGAGACGGCGGCGATTTTCGAGCGTCCCGCCGATCCTTATACGCGCAGCCTGATTGCGGCGGCTTTTCAGG TTCCGTCCGGCTGA Protein sequence : MRPSHDSHPDTPAQTLLEIADLSVRFATREVVRRVSFSVRRGETLALVGESGSGKSLTALSILQLLPDGALCSGRIALDG VPMIGAAPAVLRQMRGGVAGMIFQEPMTSLNPLHRIGRQVGEALALHGRKPDKAAVAHLLRQAGFADAETRLHAFPHQLS GGQRQRVMIAMALANDPALLIADEPTTALDVTIQAQILDLLAEQKRARQLGLLLITHDLTVVRRHADRVCVMRHGEIVEQ GAVKDVFSTPAHPYTRMLLDAEPTGTASPLPGSPPGLASARNLKVYFPIRGGLLRRVTGQVRAVDDVTLTVREGETLGLV GESGSGKSTIGQALLRLQPSEGVIRFAGHDLQGLGERSLRPLRRDMQIVFQDPFGSLSPRMSVREIIGEGLAVHEPHQKR TEREARVARALEEVGLPKDAAERYPHEFSGGQRQRIAIARALVLQPRFIVLDEPTSALDMSVQAQIVTLLRGLQARYGMG YLFISHDLRVVRALAHRVAVLRRGVVVEEGETAAIFERPADPYTRSLIAAAFQVPSG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-67 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 1e-67 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-67 | 43 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-67 | 43 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 4e-80 | 43 |
