Gene Information

Name : GbCGDNIH1_1796 (GbCGDNIH1_1796)
Accession : YP_745617.1
Strain : Granulibacter bethesdensis CGDNIH1
Genome accession: NC_008343
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 2019753 - 2020346 bp
Length : 594 bp
Strand : +
Note : -

DNA sequence : 
ATGGCGGCGGACCGCCTGCTGCTGGCGCGGCGCTATACCGAGCGGGCCGACTATGGCCATGACGGCGTCGTGGTGGCGAT
CCGCTCGAACCTGCGCTGGTGCTCGGACGGCTTCGAGTTCACCTGCTGGAACGGTGAGGTCGTGCGCGGCGCCTTCATCA
TCGACGCCCATGACCGCGAGATCATCGCCTGGCGCGCGGTCGCCAATGCGGGCATCAGCGGCTCGGACGTGCGCGATATC
ATGCTGGAGGCCGTGGAAACCCGCTTCGGCGGAATGCGCGCGCCCGTGCCGGTCGAGATGCTGTCCGATAACGGCTCGGC
CTATACCGCCCGCGAAACCCGCACCTTTGCCCGGCAGCTGGGCCTCAAACCCTGCTTCACCCCCGTCCGCAGCCCGCAGT
CCAACGGCATCTCCGAGGCCTTCGTCCATACCCTCAAGCGCGATTACGTCCGCGTCTCGCCGCTGCCCGATGCATCCACC
GCGTTGACATCGCTTGCCGGATGGATCGAAGACTACAACGACAACCACCCCCATTCAGGACTCAAAATGCGTTCACCGCG
CGAACATCGCGCATTGGTTTCTGCAACCGCTTGA

Protein sequence : 
MAADRLLLARRYTERADYGHDGVVVAIRSNLRWCSDGFEFTCWNGEVVRGAFIIDAHDREIIAWRAVANAGISGSDVRDI
MLEAVETRFGGMRAPVPVEMLSDNGSAYTARETRTFARQLGLKPCFTPVRSPQSNGISEAFVHTLKRDYVRVSPLPDAST
ALTSLAGWIEDYNDNHPHSGLKMRSPREHRALVSATA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAC39284.1 hypothetical protein Not tested LPA Protein 1e-36 54
SF2985 NP_708759.1 insertion element IS2 transposase InsD Not tested SHI-1 Protein 3e-36 53
unnamed AAL67379.1 transposase-like protein Not tested PAI II CFT073 Protein 1e-36 53
tnpF AAD44739.1 TnpF Not tested SHI-2 Protein 3e-36 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GbCGDNIH1_1796 YP_745617.1 transposase VFG0649 Protein 1e-36 53