Gene Information

Name : GbCGDNIH1_1508 (GbCGDNIH1_1508)
Accession : YP_745329.1
Strain : Granulibacter bethesdensis CGDNIH1
Genome accession: NC_008343
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 1691771 - 1692934 bp
Length : 1164 bp
Strand : +
Note : -

DNA sequence :
TTGGGCAAGCTTTCCGCCACTTCCGTGAAGGCCTCAAAGGAGCCGGGCCGCTATGGCGACGGCGACGGCCTGTACCTTGT
CATAAGTCCCCGGGGCGGGAAGTCCTGGGTTTGTCGCGTGCAGAAGGATGGCAAGCGCCGGGACGTTGGCCTGGGGAGTG
CCAAGAAGGTGTCCCTGGCCTTGGCCCGTGAGCGCGCTGCGAAGGTGCGGACACAGGTTGAGGTGGGGCTTGATCCCGTT
GCCGAGCGGCGGAAAGAGGCCGGGATACCCACCTTCAAGGAAGCCGCCGCGCTGGTGTTTGCCGAGCACAAGGCGAGCTG
GCGGAACCAAAAGCACCGGGCACAGTGGCTATCCACCCTTGAAACCTATGCGTTCCCCACGCTGGGCGATCTATCGGTTG
CCCTCATTGACGGCCACCATGTCCGGGATGCTGTGATTTCCATTTGGCTGGAAAAGCCGGAGACGGCGCGGCGCGTGCGC
CAGAGGATCAACACGGTCATCGACTGGGCAATCGGCAAGGGATACCGGACGACACCCCTACCGATTGCGGCGATGAATAA
ATCGATGCCCAAGGTTAAGGCCAAGGGGGTGCACCATACGGCCCTGCCCTACGCTGAGGTTCCGGCGTTCGTGGCTAAGC
TCAAAGAGCGGGATACTGTGGGGCGGTTGGCGCTTGAGGCGCTGATTCTCACTGCAACCAGGTCCGGCGAGATTCGCGGT
GCAACCTGGGGCGACCTTGATCTGGACAGGGGACTATGGACGATCCCCGCCGAGCGGATGAAGGCTGGGAAGGAGCATGT
TGTCCCGCTGTCATCGGCCGCCCTGGGCGTGTTCCAGCGGGCGCAGCGTTACAGGGAGGCGCGGAGCGAGTTGGTATTTC
CCGGTCAACGCGGCGGCAAGCCGCTTTCCGACATGACGCTGACCAAGATTTGCCGCGACATGGAGGTTGCCGCCGTGCCG
CATGGCTTTCGCTCATCCTTCCGCGATTGGGTGGCCGATGAGACGAATTTTGACGGCGACATAGCCGAGATGGCCCTGGC
GCACGCCATTGGGAGCAAGGTGGAAGCCGCTTACCGGAGGGGCAACCTGCTGGAGAAGCGGAAGGCGCTCATGGAGGCGT
GGGGCGATTATTGCTGTTTGAAGGTGTCTCAACCCAAGGTATAG

Protein sequence :
MGKLSATSVKASKEPGRYGDGDGLYLVISPRGGKSWVCRVQKDGKRRDVGLGSAKKVSLALARERAAKVRTQVEVGLDPV
AERRKEAGIPTFKEAAALVFAEHKASWRNQKHRAQWLSTLETYAFPTLGDLSVALIDGHHVRDAVISIWLEKPETARRVR
QRINTVIDWAIGKGYRTTPLPIAAMNKSMPKVKAKGVHHTALPYAEVPAFVAKLKERDTVGRLALEALILTATRSGEIRG
ATWGDLDLDRGLWTIPAERMKAGKEHVVPLSSAALGVFQRAQRYREARSELVFPGQRGGKPLSDMTLTKICRDMEVAAVP
HGFRSSFRDWVADETNFDGDIAEMALAHAIGSKVEAAYRRGNLLEKRKALMEAWGDYCCLKVSQPKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1120 NP_286655.1 P4 family integrase Not tested TAI Protein 6e-59 41
Z1559 NP_287063.1 P4 family integrase Not tested TAI Protein 6e-59 41
int AAL08426.1 integrase Not tested SRL Protein 1e-58 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GbCGDNIH1_1508 YP_745329.1 transposase VFG0672 Protein 7e-59 41