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Name : rplS (Mlg_0887) Accession : YP_741731.1 Strain : Alkalilimnicola ehrlichii MLHE-1 Genome accession: NC_008340 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 1006849 - 1007202 bp Length : 354 bp Strand : + Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site DNA sequence : ATGAACATCATCGAGCAGCTCGACAAGGAGCAGATGGCGGCCCGCGAGGCCAAGATTCCCGAGTTCGGTCCCGGCGACAC CGTGACCGTCCAGGTCTGGGTGAAGGAAGGCGGTCGTGAGCGTCTGCAGGCCTTCGAGGGCGTGGTGATTGCCAAGCGCA ACCGCGGCATCAACAGTGCCTTCACGGTGCGCAAGGTCTCCCATGGTGAGGGCGTCGAGCGCGTCTTCCAGACCTACAGC CCGATCATCGAGAGCGTGAAGGTCAAGCGCCGGGGTGACGTGCGCCGCGCCAAGCTTTACTACCTGCGCGAGCGCAGCGG CAAGTCTGCCCGCATCAAGGAAAAGGTGAAGTAA Protein sequence : MNIIEQLDKEQMAAREAKIPEFGPGDTVTVQVWVKEGGRERLQAFEGVVIAKRNRGINSAFTVRKVSHGEGVERVFQTYS PIIESVKVKRRGDVRRAKLYYLRERSGKSARIKEKVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 5e-35 | 69 |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 3e-25 | 54 |
