Gene Information

Name : Mlg_0674 (Mlg_0674)
Accession : YP_741518.1
Strain : Alkalilimnicola ehrlichii MLHE-1
Genome accession: NC_008340
Putative virulence/resistance : Virulence
Product : two-component response regulator CbrB
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 743173 - 744534 bp
Length : 1362 bp
Strand : -
Note : PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: pae:PA4726 probable two-component response regulator

DNA sequence : 
ATGGCACATCTGCTGATCATTGAGGATGAAGCGGTCATCCGCTCGGCCTTGCGACGCCTGCTCACGCGCAATGGCTACCG
CGTGGCCGAGGCCGAGTCCCTGGAAGAGGCGCGCGAAGGCCACCGCTTTGCCGATTACGACCTGATCATCGCCGACCTGC
GCCTGCCCGGCGAACCCGGCACCGGCGTCATCCCCCTGGCCAGTGAGGTGCCGGTGATCATCATGACCAGCTACGCCAGC
GTCCGTTCAGCGGTGGAGGCCATGCGCGAGGGGGCGGTGGACTACATCGCCAAACCCTTCGACCACGATGAGCTGCTGCT
CACCGTCGACAAGGTGCTCAAGGACCACCGGCTTCAGCGCCAGAATGCGGCCCTGAAGGCCGATATCCAGCGCGACTACC
CGGTGAGCGGCATCATTGGCGAGTGCCAGGCGATGCAGGCCGTCTTCCAGCGCATCCACAAGGTGGCGCCCACCGACACC
TCCGTGCTGATCCTGGGTGAATCGGGGACCGGTAAGGAACTGGTGGCCCGGGCCGTTCACGAGCACAGCCAGCGTAAGGA
TGGGCCGCTGATCGCGGTCAACTGCGCCGCCATCCCCGAGACCCTGATCGAGGCAGAGCTTTTCGGCCACGAGAAGGGGG
CCTTTACCGGGGCGGTGGGCGCCCGCGCCGGTCTGGTGGAGTCGGCCGACGGCGGCACCCTGTTCCTGGATGAGATCGGC
GAGCTGCCCCTTCAGGCCCAGGGCCGTCTGCTCCGGGTGCTGCAGGAGGGCGAGATCCGCCGGGTGGGGGCATCCCGCGA
ACGGCAGGTGGACGTGCGCCTGCTGGCCGCAACCCACCGTGACCTCCAGGCGCTGGTGGATGAGGGGAGTTTCCGCGAGG
ACCTCTACTTCCGCATCCATGTCATGGAGATCCGCCTGCCGCCGCTGCGCGAACGGGAGGGCGACATCCCCATCCTGGCC
CGGGTGCTGCTGGAAAAGACCTGCCAGCGCCTCAACCGGCCGCAGCTGCAACTCGCTGAGGAGGCGATAGAGGCCATCAG
CAACTACCATTGGCCGGGGAACGTCCGGGAGATGGAGAACACCATCGAGCGCGCCGTGATCCTGTGCGAGGGTGACACCA
TCACCGCCGACCAACTCACCCTGCCCCGCACCCGCCCACGGGACAGTGCGCCGACGGCCCGGCCGGGCAACGGAGGGGGC
GGCGCACGCCCGGATCTGTCGCTGGAAGACTACTTCCGGGAGTATGTTCTGGCCAACCAGGACCATATGACGGAGACCGC
CCTGGCCAAGGGGCTGGGTATCAGCCGCAAGGCGCTGTGGGAGAAGCGCCAGCGGCTGGGGATCCCACGGCCGAGAAAAT
AA

Protein sequence : 
MAHLLIIEDEAVIRSALRRLLTRNGYRVAEAESLEEAREGHRFADYDLIIADLRLPGEPGTGVIPLASEVPVIIMTSYAS
VRSAVEAMREGAVDYIAKPFDHDELLLTVDKVLKDHRLQRQNAALKADIQRDYPVSGIIGECQAMQAVFQRIHKVAPTDT
SVLILGESGTGKELVARAVHEHSQRKDGPLIAVNCAAIPETLIEAELFGHEKGAFTGAVGARAGLVESADGGTLFLDEIG
ELPLQAQGRLLRVLQEGEIRRVGASRERQVDVRLLAATHRDLQALVDEGSFREDLYFRIHVMEIRLPPLREREGDIPILA
RVLLEKTCQRLNRPQLQLAEEAIEAISNYHWPGNVREMENTIERAVILCEGDTITADQLTLPRTRPRDSAPTARPGNGGG
GARPDLSLEDYFREYVLANQDHMTETALAKGLGISRKALWEKRQRLGIPRPRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 4e-67 42
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 4e-67 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mlg_0674 YP_741518.1 two-component response regulator CbrB BAC0089 Protein 3e-83 47
Mlg_0674 YP_741518.1 two-component response regulator CbrB BAC0467 Protein 3e-76 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mlg_0674 YP_741518.1 two-component response regulator CbrB VFG0116 Protein 2e-70 44
Mlg_0674 YP_741518.1 two-component response regulator CbrB VFG1249 Protein 4e-65 44
Mlg_0674 YP_741518.1 two-component response regulator CbrB VFG1214 Protein 6e-70 43