Gene Information

Name : Mlg_2399 (Mlg_2399)
Accession : YP_743229.1
Strain : Alkalilimnicola ehrlichii MLHE-1
Genome accession: NC_008340
Putative virulence/resistance : Virulence
Product : general secretory pathway protein E
Function : -
COG functional category : N : Cell motility
COG ID : COG2804
EC number : -
Position : 2724552 - 2726099 bp
Length : 1548 bp
Strand : -
Note : KEGG: pae:PA3103 general secretion pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase

DNA sequence :
ATGCTGCCGACCATGAGCGCGGTGGACGAACAACTGGATGCCTTGCAGGGCGGTGAGGGGCCGCCGCCCACGGTCTCGGA
GCACCGTCCGGTCTCCTTCAACTGGGCCCGGCGCCACGGTGCCGTGCCGCTGGATTGGAGCGACGCGGCGGCCCGCATCG
CCTGCCGCGCCGACGTCAGCCCCCAGGCCCTGGTGGAACTGCGCCGCCAGCTCGGGCGGCCGCTGGCCCTGGAGGAGGTG
GATGACGAGACCTTCAACCAGTACCTGCAGGCGTGCTACGAGCGCAGCGCCGGTGAAGCGGCCGAGATGATGGCCGGCCT
CGGCGACGACCTGGACCTGCACAGCGTCGCCGAGCAACTGGCCGAGCCCGAGGACCTGATGGAGAGCGAGGATGATGCGC
CCATCATCCGCCTCATCAACGCGCTGCTCACCGAGGCCATCAAGGAGGACGCCTCCGACATCCACATCGAGACCTTCGAG
CACCGCATGACGGTGCGCTTCCGGGTGGACGGCGTGCTGCGCGAGGTGTTGCAGCCGCCGGTGGGCCTGGCCCCGCTGCT
CACCTCCCGCATCAAGGTCATGGCCGAGCTCGACATCGCGGAAAAGCGCCTGCCCCAGGACGGCCGCATCTCCCTACGGG
TGGCCGGCCGCGCCGTGGACGTGCGGGTCTCCACGCTGCCGGCCGGGCAGGGCGAGCGCGTGGTGTTGCGCTTGCTGGAC
AAGCGGGCCGGCCGGCTGGATCTGACCCACCTGGGCATGGAGCCGAAGACCCTGCGGTGCATGGCCGATCTGGTCAACAA
GCCGCACGGCATCCTGCTGGTCACCGGCCCCACCGGGTCGGGCAAGACCACCACCCTCTACGCCGCGATCAGCCGGATCA
ACGACCGGCAGCGCAACATCATGACGGTGGAGGACCCCATCGAGTACTACCTGGACGGGGTCAGCCAGACACAGGTGAAC
ACCAAGGTGGACATGACCTTCGCCCGCGGCCTGCGCGCCATCCTGCGCCAGGACCCGGACGTGGTCATGATCGGCGAGAT
CCGCGACCTGGAGACCGCACAGATCGCCGTCCAGGCCAGCCTCACCGGCCACCTGGTGCTCTCCACCCTCCACACCAACA
CCGCCATCGGTGCGGTCACCCGTCTGCGCGACATGGGCGTGGAACCCTACCTGCTCTCCTCCAGTATGCTGGGCATGATG
GCCCAGCGCCTGGTGCGGCTGCTCTGCCCGGAGTGCCGCCAGCCCTACACCGCCGATGCCACGGAATGCGAACTGCTGGG
CCTGGACCCGCAACACCCACCCACCCTGCACGCCCCGGTCGGCTGCGACGCCTGCCATCAGACCGGCTACCAGGGGCGCA
CCGGCATCTACGAGATCATCGCCCTGGACGAAACCCTGCGCACCATGATCCACGACGGCGCCGGCGAGCAGCAGATGGAG
CACCACGCCCGCACCCTCACCCCCAGCATCCGGGCCGACGGCGTCCGACGGGTGCTGTCCGGCGAGACCTCTGTCGAGGA
GGTCCTGCGGGTCACCCGCGAGGAATAG

Protein sequence :
MLPTMSAVDEQLDALQGGEGPPPTVSEHRPVSFNWARRHGAVPLDWSDAAARIACRADVSPQALVELRRQLGRPLALEEV
DDETFNQYLQACYERSAGEAAEMMAGLGDDLDLHSVAEQLAEPEDLMESEDDAPIIRLINALLTEAIKEDASDIHIETFE
HRMTVRFRVDGVLREVLQPPVGLAPLLTSRIKVMAELDIAEKRLPQDGRISLRVAGRAVDVRVSTLPAGQGERVVLRLLD
KRAGRLDLTHLGMEPKTLRCMADLVNKPHGILLVTGPTGSGKTTTLYAAISRINDRQRNIMTVEDPIEYYLDGVSQTQVN
TKVDMTFARGLRAILRQDPDVVMIGEIRDLETAQIAVQASLTGHLVLSTLHTNTAIGAVTRLRDMGVEPYLLSSSMLGMM
AQRLVRLLCPECRQPYTADATECELLGLDPQHPPTLHAPVGCDACHQTGYQGRTGIYEIIALDETLRTMIHDGAGEQQME
HHARTLTPSIRADGVRRVLSGETSVEEVLRVTREE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 2e-133 59
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-133 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mlg_2399 YP_743229.1 general secretory pathway protein E VFG0182 Protein 2e-158 67
Mlg_2399 YP_743229.1 general secretory pathway protein E VFG1876 Protein 5e-135 59
Mlg_2399 YP_743229.1 general secretory pathway protein E VFG2048 Protein 3e-133 59
Mlg_2399 YP_743229.1 general secretory pathway protein E VFG2426 Protein 7e-73 48
Mlg_2399 YP_743229.1 general secretory pathway protein E VFG0112 Protein 2e-81 45