Gene Information

Name : Mlg_2392 (Mlg_2392)
Accession : YP_743222.1
Strain : Alkalilimnicola ehrlichii MLHE-1
Genome accession: NC_008340
Putative virulence/resistance : Virulence
Product : general secretion pathway protein F
Function : -
COG functional category : N : Cell motility
COG ID : COG1459
EC number : -
Position : 2714886 - 2716100 bp
Length : 1215 bp
Strand : -
Note : TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: son:SO0168 general secretion pathway protein F

DNA sequence : 
ATGGGCGCCTACGAGTATCAGGCACTGGATCCGGGCGGCCGCCAGCGCAAGGGTGTGCTCGAGGGGGACACCCCGCGTCA
CGTCCGCGCCCAACTGCGCGACCGCGGGCTTACGCCCCTGGCCGTGCAGGCCGTGGTGGAGCGGGAGGCGCGTGCGGTGC
GCCGGCCGCTGTTCACCCGCGGGGTCAGCGCCACCGATCTGGCCCTGATCACCCGCCAGATGGCCACCCTGGTGCGCTCC
GGCCTGCCGCTGGAGGACGTCCTGCGCACCGTCTCCCGGCAGACCGACAAGCCCCGCCTCAAGAGCCTGATGCTGGCGGT
GCGCAACCGCGTGCTGGAGGGTCACACCCTGGCCCAGGGGTTGGGCGATTTCCCCCACGTCTTCCCCGATATCTACCGCA
CCACGGTAGCCGCCGGCGAGAAGTCCGGCCACCTGGACATCGTGCTGGAGCGGCTGGCGGAATACACCGAGGGCCGCCAG
CAGATGCGCCAGAAGGTGCAGATGGCGCTGTTCTACCCGATCATCCTCACGGTCATGGCCATCGGCGTCACCCTCACCCT
GCTCACCTACGTGGTGCCGGAGGTGGTGGGGGTGTTCGACCACATCGGTCAGGATCTGCCGCTGCTCACCCAGTCGCTGA
TCGTCACCAGCGACTTCATGCGCGACTATGCCCTCTACGGCCTGATCGGCGGTATCGTGGGGCTGCTGGTGCTGGCCCGG
ATCCTGCGCCGGCCCGGGCCCCGTTACGCCCTGCACAGCCTGCTGCTGCGACTGCCCCTGATCGGGCGCCTGACCCGGGG
GGTGAACGCCGCCCGCTTTGCCCGCACCCTGAGCATCCTCACCGCCAGCAGCGTGCCGGTGCTGGAGGCGCTGCGGGTGG
CCGGCGCGGTGGTCAACAACGACCCCATGCGGCGCGGGGTGGAGGAGGCCGCCCGGCGCGTGCGCGAGGGCAGCGGTCTG
GCCCACGCCCTGGAACGGACCGGCTACTTCCCGCCCATCACCGTGCACCTGATCGCCAGCGGCGAGGCCGGTGGCAAGCT
GGAGCAGATGCTGGACCGGGCGGCGGAGAACCAGGAGCGGGAGCTGGAGAGCCTCACCGGCATGTTCCTGGGGCTGTTCG
AGCCGCTGCTGATCCTGCTCATGGGCGGCGTGGTCATGGTGATCGTGCTTGCCATCCTGTTGCCGGTCTTCGAACTCAAT
CAGTTGGTGCAATAG

Protein sequence : 
MGAYEYQALDPGGRQRKGVLEGDTPRHVRAQLRDRGLTPLAVQAVVEREARAVRRPLFTRGVSATDLALITRQMATLVRS
GLPLEDVLRTVSRQTDKPRLKSLMLAVRNRVLEGHTLAQGLGDFPHVFPDIYRTTVAAGEKSGHLDIVLERLAEYTEGRQ
QMRQKVQMALFYPIILTVMAIGVTLTLLTYVVPEVVGVFDHIGQDLPLLTQSLIVTSDFMRDYALYGLIGGIVGLLVLAR
ILRRPGPRYALHSLLLRLPLIGRLTRGVNAARFARTLSILTASSVPVLEALRVAGAVVNNDPMRRGVEEAARRVREGSGL
AHALERTGYFPPITVHLIASGEAGGKLEQMLDRAAENQERELESLTGMFLGLFEPLLILLMGGVVMVIVLAILLPVFELN
QLVQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspF YP_854405.1 type II secretion protein GspF Not tested PAI I APEC-O1 Protein 5e-54 48
gspF CAE85232.1 GspF, hypothetical type II secretion protein Not tested PAI V 536 Protein 4e-54 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mlg_2392 YP_743222.1 general secretion pathway protein F VFG2049 Protein 1e-52 46
Mlg_2392 YP_743222.1 general secretion pathway protein F VFG1870 Protein 9e-58 45