|
Name : Mlg_1472 (Mlg_1472) Accession : YP_742311.1 Strain : Alkalilimnicola ehrlichii MLHE-1 Genome accession: NC_008340 Putative virulence/resistance : Unknown Product : RNA-binding S1 domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 1679762 - 1682110 bp Length : 2349 bp Strand : + Note : PFAM: RNA binding S1 domain protein; SMART: Resolvase, RNase H domain protein fold; KEGG: eba:ebA6834 conserved hypothetical protein, s1 RNA binding domain protein DNA sequence : ATGACCGATATCCCCCATCAGATTGCCGAAGAACTCGGCGTCCAGCCGCGCCAGGTGGAGGCCAGTGTGGCGCTCCTGGA TGGCGGCGCCACGGTCCCGTTCATCGCCCGCTACCGCAAGGAGGCCACCGGCGGCCTGGACGACAGCCAGTTGCGCCGCC TGGAGGAGCGGTTGACCTACCTGCGCGAGCTGGCGAGCCGGCGGGAGACCGTCCTCAAGACCATCCGGGACCAGGGCAAG CTTACCCCGCAACTGGAGACGGACATCCGCGCCGCCGACAGCAAGACCCGGCTGGAGGACCTCTACCGCCCCTATCAGCC CAAGCGTCGCACCAAGGCCCAGATCGCCCGGGAGCTCGGCCTGGAGCCGCTGGCCGACAGCCTGCTGGAGGACCCCTCGC AGGCGCCGGAGGCGCTGGCCGCGGACTATCTGGTGCCCGCGGGCCCGGACGGCAAAGGCGGCGTCCCCGATGCCCAGGCG GCACTGGACGGCGCCCGTCAGATCCTGATGGAGCGCTTCGCCGAGGATGCCGAGCTGGTCGGCCGGCTGCGCGAGTGGGC CTGGGGCAACGCCCGGCTGCGCAGCCGGGTTATCGAGGGCAAGGAGCGGGAGGGCGCCAAGTTCCGTGACTACTTCGAGC ACGAGGAGCCGCTGGCCCGCATCCCCTCCCACCGTGCGCTGGCCCTGTTCCGCGGCCAGAGCGAGGATATCCTGCAATTG AGCCTGATCTGGGAAGGGGAGGACGGCGAGAGCCCCACCGCGGAGGGCATGATCGCGCGCCGCTTCGGTATCCGTCATGG GGACCGTCCCGCCGACGACTGGCTGGCCCGCACCGTGCGCATGAGCTGGCGCGTCAAGCTGTCGCTGCAGCTGGAACTGG CCCTGAAGCGCCGGCTGCGCGAGGCCGCCGAGGAGGAGGCCATCCGCGTCTTCGGGCGTAACCTCAACGACCTGCTGCTG GCCGCCCCGGCCGGTGCGGTCGCCACCATGGGGCTGGACCCGGGCATCCGCACCGGGGTCAAGGTGGCCGTGGTCGACGG CACCGGCAAGGTGGTAGACACCGCGACGGTGCACCCCTTCCCCCCGCGCAATGACCGCAACGGTGCCCTGGCCACCCTCG CCGGGCTGGCCAAGCGGCACGCCGTCCGCCTGGTGGCCATTGGCAATGGCACCCATTCGCGCGAGACCGATGCCCTGGTG GCGGAACTGATGCAGGCCATGCCGGAACTCCCACTCACCCGGGTCACCGTCTCCGAGGCCGGGGCCTCGGTCTACTCGGC GTCTGAGTACGCCAGCCGTGAACTGCCGGAACTGGACGTGGCCCTGCGCGGGGCGGTCTCCATCGCCCGGCGCCTGCAGG ACCCGCTGGCCGAGCTGGTGAAGATCGAGCCCAAGGCCATCGGCGTCGGCCAGTACCAGCACGATGTCAGCCAGGTGAAG CTGGCGCGCACCCTGGACAACGTGGTGGAGGACTGCGTGAACGCCGTGGGCGTGGACGTGAACACCGCCTCCGCCCCGCT GCTCGCCCGGGTCGCCGGCCTCACCCCCGCGCTGGCCGAGAACGTGGTCAGCCACCGCGACCGGCACGGGCCCTTTCCCG ACCGGAAGACCCTGCTCGAGGTGCAGCGCCTGGGCCCCAAGGCCTACGAGCAGTGCGCCGGTTTCCTTCGGATCCGCGGT GGCCGCAATCCCCTGGATGCCAGCGCCGTCCACCCGGAGGCCTATCCGGTGGTCGAGCGGATCCTCAAGGACAGCGGCAA GTCCATTGACCAGCTCATCGGCGACAGCCCATTCCTGCAGCGGCTCGAACCGGCCCGCTACACCGATGACCAGTTCGGCG AGCCGACGGTGCGCGACATCCTCGCCGAGTTGGACAAACCCGGTCGTGACCCGCGCCCGGAGTTTCGCACCGCCCGCTTC CGCGAGGGGGTGAACACCCTGCAGGACCTGGCGCCGGGCATGGTGCTGGAGGGAACGGTCACCAACGTGACCAACTTCGG CGCCTTCGTCGATATCGGTGTCCACCAGGACGGTCTGGTGCACATCTCGGCGCTGGCCGAGCGCTTCGTGCGCGACCCGC ACGAGGTGGTCAAGGCCGGCGACATCGTCAAGGTGAAGGTCATGGAGGTGGACCTCGAGCGCAAGCGCATCGGCCTGTCC ATGCGCCTGGATGACGAACCCGGAGAGGGCCGGTCGCGCCGCGGCAGCAAGCCGGCCGATGGCGCCGCGGCCCGGCGGGG TAAGGGCGGCAAGGACAACCGGCCCCAGGGGGGGCGCGGCGCCCGTCGCGAGGAGAAGCCCATGGGTGCCATGGCCGAGG CACTGGCGGCCCTGAAAAAGGGGCAATGA Protein sequence : MTDIPHQIAEELGVQPRQVEASVALLDGGATVPFIARYRKEATGGLDDSQLRRLEERLTYLRELASRRETVLKTIRDQGK LTPQLETDIRAADSKTRLEDLYRPYQPKRRTKAQIARELGLEPLADSLLEDPSQAPEALAADYLVPAGPDGKGGVPDAQA ALDGARQILMERFAEDAELVGRLREWAWGNARLRSRVIEGKEREGAKFRDYFEHEEPLARIPSHRALALFRGQSEDILQL SLIWEGEDGESPTAEGMIARRFGIRHGDRPADDWLARTVRMSWRVKLSLQLELALKRRLREAAEEEAIRVFGRNLNDLLL AAPAGAVATMGLDPGIRTGVKVAVVDGTGKVVDTATVHPFPPRNDRNGALATLAGLAKRHAVRLVAIGNGTHSRETDALV AELMQAMPELPLTRVTVSEAGASVYSASEYASRELPELDVALRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVSQVK LARTLDNVVEDCVNAVGVDVNTASAPLLARVAGLTPALAENVVSHRDRHGPFPDRKTLLEVQRLGPKAYEQCAGFLRIRG GRNPLDASAVHPEAYPVVERILKDSGKSIDQLIGDSPFLQRLEPARYTDDQFGEPTVRDILAELDKPGRDPRPEFRTARF REGVNTLQDLAPGMVLEGTVTNVTNFGAFVDIGVHQDGLVHISALAERFVRDPHEVVKAGDIVKVKVMEVDLERKRIGLS MRLDDEPGEGRSRRGSKPADGAAARRGKGGKDNRPQGGRGARREEKPMGAMAEALAALKKGQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 60 |
