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Name : Mlg_1309 (Mlg_1309) Accession : YP_742148.1 Strain : Alkalilimnicola ehrlichii MLHE-1 Genome accession: NC_008340 Putative virulence/resistance : Virulence Product : Fis family transcriptional regulator Function : - COG functional category : K : Transcription COG ID : COG3829 EC number : - Position : 1509484 - 1510467 bp Length : 984 bp Strand : - Note : PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: noc:Noc_0537 sigma-54 specific transcriptional regulator, fis-type DNA sequence : ATGGGCAAGCTATTAGGTCATTCACCGGAACTGCAATCGGTGCTGCGAGCGGCTCGATTGGTCGCCAGCACCGAGGTCAC CACCCTGATCCTGGGTGAAAGCGGCACCGGCAAGGAGTTGCTGGCCCGCACGGTCCACGCGGAGAGCCCGCGGGCCAACG GCCCTTTCGTGGCCGTCAACTGTGCGGCGCTGCCGGAAGGCCTGGCCGAGTCCGAGTTGTTCGGTCACCGGCGCGGCGCC TTTACCGGCGCCGTCGATCCCCACGACGGCCGGATCGCCGCCGCAGCCAATGGTACCCTGTTTCTGGACGAGGTCGGCGA ACTGCCTGCCGCCGTGCAGGCCAAACTGTTGCGCTTTTTGGAGTCCGGGGAATGTCAACCGCTGGGCGCCACTCGCCCGC AATCGGTCAATACCCGCGTCGTGGCCGCCACCCACCGCGATCTGTACCAGGACGTGGAGGCAGGCCGCTTCCGCGCCGAC CTCTACTACCGGCTACAGGTCATCCCCTTGGAGCTGCCGGCGTTGCGTGAGCGCCCGGCGGATATCCCGGTCCTGCTTGA CCACTTCCTGCAGGCCCTGGCCAGACACCACGACCTGCCCGCTCCGCGGCTCCAGCCCGATGCCCTTCGCTGCCTGCAGC GCTACCCCTGGCCGGGCAATGTCCGGGAGTTGCGCAACACCTGCGAGCGCCTGGTGGTGCTGCACGCCGGGCGCACCCTC ACGGCCGGGGCCTTACCCCCGGAGATCCAGCAGGCCCCCGCGGCGGCACCGCGGGCCAATGGCTTCCGGCTGCCGGCGGG GGGCATCCAAATGGATGAGCTCGAGGCGGACCTGATCCGCCAGGCGTTGGAACGGACCGGCGGCAACCGCAGTCAGGCCG CCCGCCTGCTCGGTCTGACCCGCGACACACTGTTGTACCGGATGAAGAAATACGACCTTACCGAGGCCCCCGTCGCGGCG TCCGCATCGGCCGTACCCGCATGA Protein sequence : MGKLLGHSPELQSVLRAARLVASTEVTTLILGESGTGKELLARTVHAESPRANGPFVAVNCAALPEGLAESELFGHRRGA FTGAVDPHDGRIAAAANGTLFLDEVGELPAAVQAKLLRFLESGECQPLGATRPQSVNTRVVAATHRDLYQDVEAGRFRAD LYYRLQVIPLELPALRERPADIPVLLDHFLQALARHHDLPAPRLQPDALRCLQRYPWPGNVRELRNTCERLVVLHAGRTL TAGALPPEIQQAPAAAPRANGFRLPAGGIQMDELEADLIRQALERTGGNRSQAARLLGLTRDTLLYRMKKYDLTEAPVAA SASAVPA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpS | AAT96161.1 | HrpS | Virulence | T-PAI | Protein | 3e-37 | 44 |
| hrpS | AAT96215.1 | HrpS | Virulence | T-PAI | Protein | 3e-37 | 44 |
| hrpR | AAC35799.1 | transcriptional regulator | Virulence | Hrp PAI | Protein | 7e-39 | 42 |
| unnamed | AAT96283.1 | HrpS/HrpR-like protein | Not tested | S-PAI | Protein | 6e-41 | 41 |
| unnamed | AAT96324.1 | HrpS/HrpR-like protein | Virulence | S-PAI | Protein | 6e-41 | 41 |
| unnamed | AAT96363.1 | HrpS/HrpR-like protein | Virulence | S-PAI | Protein | 6e-41 | 41 |
| hrpR | ABQ88368.1 | HrpR | Virulence | Hrp PAI | Protein | 2e-38 | 41 |
| hrpR | AAA17651.1 | positive regulatory factor | Not tested | Hrp PAI | Protein | 2e-38 | 41 |
