Gene Information

Name : Mlg_1043 (Mlg_1043)
Accession : YP_741886.1
Strain : Alkalilimnicola ehrlichii MLHE-1
Genome accession: NC_008340
Putative virulence/resistance : Virulence
Product : ABC-3 protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 1193119 - 1194057 bp
Length : 939 bp
Strand : +
Note : PFAM: ABC-3 protein; KEGG: bat:BAS2965 ABC transporter, permease

DNA sequence : 
ATGGACATGCTGGAGGCATTGGGGCTGGCGCTGGTGGATGCCCTGCTGGCGGTGCTGCTGCTGGTGGTGGGGCTGCTGCC
GGAGCCCCTGGCGGCCCCCTTTGAATACGGCTTCATGCAGCGGGCGCTGCTCACCTCCGTGCTGGTGGGCACCGTTTGCG
GCATGCTCTCCTGCTATGTGGTGCTCAAGCGCTGGTCGCTGCTGGGTGATGCCATCTCTCACGCGGTGCTGCCGGGGGTG
GCGGTGGCCTACCTCCTGGGTTGGCCCTTTTTTATCGGTGCATTCATCACCGGTGCCCTGACCTCCCTGGGTATCGGTGC
CATTGAACGCCACACCCGGATCAAGTCCGATGCCGCCATGGGGCTGATGTTCACGGCCGCCTTTGCGCTGGGTATCGTGA
TCATAAGCAAGATCGCCTCCAGCACCCACCTGATGCACATCCTGTTCGGCAATGTGCTGGGCGTGCAGCATTCGGCGCTG
CTGTTGACCCTGGTATCCGGCATTGTTGCCTTTCTGGTGGTCTGGTTATTCTATCGGCCGCTGCTGCTGTACACCTTCGA
CCCGCTTCAGGCGCAGGCCCTGGGGTTTCGCACCGGGGCCATCCACTATGGCCTGATCCTGCTGCTGACCCTGACCATTG
TCGCCAGCCTGGAGACGGTGGGGATCATCCTGGTGGTGGCCATGCTGATCACCCCCGGCGCCACCGCCCACCTGCTCACC
GAGCGGCTGACCACCATGATGCTGCTCTCTATCGGCGTTGGGGTGATATCGGCCGTGGTGGGGCTGTACCTCTCCTTCTT
CTTCGACGTGGCCTCCGGCGGGGCCATTGTCCTGGTCGCCACCGGTCTCTTTCTGATCGCCCTGCTGCTGGCACCCCGCC
ACGGCCTGTTGGCCCGTTGGTGGCGGCGGCGCAGCGTTCCGACCCTCCCCGGGGCCTGA

Protein sequence : 
MDMLEALGLALVDALLAVLLLVVGLLPEPLAAPFEYGFMQRALLTSVLVGTVCGMLSCYVVLKRWSLLGDAISHAVLPGV
AVAYLLGWPFFIGAFITGALTSLGIGAIERHTRIKSDAAMGLMFTAAFALGIVIISKIASSTHLMHILFGNVLGVQHSAL
LLTLVSGIVAFLVVWLFYRPLLLYTFDPLQAQALGFRTGAIHYGLILLLTLTIVASLETVGIILVVAMLITPGATAHLLT
ERLTTMMLLSIGVGVISAVVGLYLSFFFDVASGGAIVLVATGLFLIALLLAPRHGLLARWWRRRSVPTLPGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0576 NP_814341.1 cation ABC transporter permease Not tested Not named Protein 2e-46 45
ef0094 AAM75297.1 EF0094 Not tested Not named Protein 1e-46 45
sitD NP_461785.1 permease Virulence SPI-1 Protein 4e-42 44
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 3e-42 44
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 7e-42 43
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 7e-42 43
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 7e-42 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mlg_1043 YP_741886.1 ABC-3 protein BAC0442 Protein 2e-46 45
Mlg_1043 YP_741886.1 ABC-3 protein BAC0352 Protein 2e-42 44
Mlg_1043 YP_741886.1 ABC-3 protein BAC0441 Protein 6e-40 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mlg_1043 YP_741886.1 ABC-3 protein VFG0528 Protein 2e-42 44