|
Name : cvrA; nhaP2; ycgO (Shewmr7_0884) Accession : YP_736940.1 Strain : Shewanella sp. MR-7 Genome accession: NC_008322 Putative virulence/resistance : Unknown Product : potassium/proton antiporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG3263 EC number : - Position : 1010299 - 1012023 bp Length : 1725 bp Strand : + Note : the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli DNA sequence : GTGGATGCAGATTCCATCAATAGTTTTTTTCTGATCGGTGCCTTGCTTGCCGCTGTGAGTGTTTTGTTAAGTCCCGTGTC TTCGCGCTTGGGTATCCCTATCTTATTAATTTTCCTCGCGGTAGGGATTTTAGCGGGGGAAGATGGTCCCGGCGGCATTC TGTTTGATGACTACTCAACCGCTTATCTTGTCAGTAACTTAGCCTTAGCCATTATCTTGCTCGATGGCGGTATGCGCACG CGGGTCGCAAGCTTTAGGGTGGCACTGTGGCCAGCATTATCGTTGGCGACCTTCGGAGTCGCTATCACCACCAGTATCAC TGGTGTGATGGCCGCATGGCTATTTGACTTACACTGGCTACAAGGTTTGCTGGTGGGGGCAATTGTCGGCTCCACCGATG CGGCGGCGGTATTCTCACTGTTAAAGGGGCGCAGCCTAAATGAGCGTGTTGGCGCGACGCTGGAAATCGAATCGGGCAGC AACGACCCTATGGCGGTGTTTTTAACCGTGACCCTGATTGCCATCCTAGGCAATGTGGACGCCGAGCTATCCGCAAGCTT TATGCTGATAAGCTTTATCAAGCAGTTTGGCTTGGGGATTTTCCTCGGCCTCGGTGGCGGTTGGCTGCTGTGGAAGCTCG TGAATCTAAGCAAGCTTGCCGAAGGTTTGTATTCGATTTTAGTGCTCAGTGGTGGCCTGATGATTTACGCCGCGTCGAAC AAACTTGGCGGCAGTGGCATCCTGTCGATTTACTTAGTTGGTTTATTCCTTGGCAACAAGCCTACCCGTGGTCGCCATTC AATCTTAAACGTGTTGGATGGCATGACCTGGGTCAGTCAAATCGGTATGTTCCTGGTATTAGGGCTACTGCTCACACCGT CTGACTTGTTGGACATTTGGCTGCCAGGTTTAGCGTTAGCCTTTGGGATGATCCTTTTTGCCAGACCGTTAGCCGTATGG CTCAGCTTGTTACCTTTTAAGAGTTTTAGCAGTCGTGACCGCTGGTTTATCTCTTGGGTCGGGCTTCGCGGCGCCGTGCC GATTATTTTAGCGGTATTCCCTATGATGGCGGGATTACCGGGCGCTCAGTTGTACTTTAACTTGGCGTTTTTCGTGGTGT TAGTGTCGCTGTTAGTGCAAGGGGCGTCACTCACCACCGCGGCGCGTTTAGCTAAGGTCGAATTACCGCCTAAGCCATTA CCTATTTCACGCTCTGGGGTCGAAATTTACCCTAGCAGCGAGTGGGAAGTGTTTGTTTATCGGTTGAGTGAAAACAAATG GTGTATCGGCGAGCCGCTTAAACGTCTTTCTATGCCTGATGGGACCCGGATTGCGGCGGTATTTCGCCATAACACACTGT TGCACCCATCGGGCAGCACCTGCCTCGAAGCGGGAGATATTTTGTGCGTGCTCGGGCAAGAAAAGAGTCTAGAGGCTTTG AGTAACCTCTTTAGTCAGGCGCCTGAAACTAAAGAAGTACCACGTTTCTTCGGGGACTTCTTTATCGATACCGAGGTTAA GCTGCTGGATCTGGCGCCAATTTATGGTCTGGAGTTAGACGAAGCAACCGGTGATATGACTGTCGCAGATTTAGTGGCGG CAGAATTAGGTTCACATCCGGTACTTGGGGATCAGTTCCTGTGGCAGTCACTGCATTGGGTGGTCGCAGGGCTTTATGAA GGCAAAGTCACCAATGTGGGTATTCGCTTACCAGCTGAGGCGTAA Protein sequence : MDADSINSFFLIGALLAAVSVLLSPVSSRLGIPILLIFLAVGILAGEDGPGGILFDDYSTAYLVSNLALAIILLDGGMRT RVASFRVALWPALSLATFGVAITTSITGVMAAWLFDLHWLQGLLVGAIVGSTDAAAVFSLLKGRSLNERVGATLEIESGS NDPMAVFLTVTLIAILGNVDAELSASFMLISFIKQFGLGIFLGLGGGWLLWKLVNLSKLAEGLYSILVLSGGLMIYAASN KLGGSGILSIYLVGLFLGNKPTRGRHSILNVLDGMTWVSQIGMFLVLGLLLTPSDLLDIWLPGLALAFGMILFARPLAVW LSLLPFKSFSSRDRWFISWVGLRGAVPIILAVFPMMAGLPGAQLYFNLAFFVVLVSLLVQGASLTTAARLAKVELPPKPL PISRSGVEIYPSSEWEVFVYRLSENKWCIGEPLKRLSMPDGTRIAAVFRHNTLLHPSGSTCLEAGDILCVLGQEKSLEAL SNLFSQAPETKEVPRFFGDFFIDTEVKLLDLAPIYGLELDEATGDMTVADLVAAELGSHPVLGDQFLWQSLHWVVAGLYE GKVTNVGIRLPAEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAB61290.1 | unknown | Not tested | PAI I CFT073 | Protein | 1e-115 | 59 |
| f536 | AAC61706.1 | F536 | Not tested | PAI I CFT073 | Protein | 1e-115 | 59 |
