Gene Information

Name : alr (Shewmr7_0693)
Accession : YP_736752.1
Strain : Shewanella sp. MR-7
Genome accession: NC_008322
Putative virulence/resistance : Unknown
Product : alanine racemase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0787
EC number : 5.1.1.1
Position : 813555 - 814631 bp
Length : 1077 bp
Strand : +
Note : converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer

DNA sequence : 
TTGAAACCTTTTCCCCGAGCAGAAATTAGCAGTAGTGCACTGCAAAACAATCTCGCCGTCTTGCGTCAACAGGCGAGTCG
CAGCCAAGTGATGGCTGTGGTGAAAGCCAATGGTTATGGTCATGGATTATTAAATGTCGCCAACTGTTTACACACTGCCG
ATGGCTTTGGTCTAGCCCGTTTAGAAGAGGCCTTAGAGCTGCGCGCCGGTGGCGTGAAGGCGCGCTTGTTATTGCTTGAA
GGCTTCTTTCGTAGCACTGATTTACCTTTGTTGGTGGCCCACGATATCGATACTGTGGTGCACCATGAGTCTCAAATCGA
GATGTTAGAGCAGGCGACGCTATCAAAACCTGTCACCGTATGGTTGAAAGTGGATTCTGGCATGCATCGTTTAGGCGTGA
CGCCTGAGCAATTTGCGCAGGTGTATGCGCGTTTGACGGCCTGTGACAATGTTGCCAAGCCCATACATTTGATGACTCAC
TTTGCCTGTGCCGATGAGCCTGAAAATAATTACACCCAAGTGCAAATGCAAACCTTTAACCAGTTAACCGCGGATTTGCC
TGGATTTAGAACCTTAGCCAATTCTGCGGGCGCCCTCTATTGGCCCAAAAGCCAAGGGGATTGGATCCGCCCAGGAATCG
CACTCTATGGCGTGTCTCCCGTTACGGGGGATTGCGGTGCCAATCATGGTCTGATCCCGGCGATGAACTTAGTCTCGCGT
TTGATTGCGGTGCGCGATCACAAGGCGGGACAACCCGTTGGCTATGGTTGTTATTGGACGGCGAAACAAGATACTCGCCT
TGGTGTTGTGGCGATTGGCTATGGTGATGGTTATCCGCGTAATGCGCCCGAAGGCACGCCTGTGTGGGTGAATGGTCGCC
GAGTGCCGATTGTTGGTCGTGTATCTATGGATATGTTAACCGTTGATTTAGGCGCCGATGCGGCAGACCAAGTTGGCGAT
GAAGCCCTGCTTTGGGGCGCCGCCTTGCCCGTTGAGGAAGTGGCCGAACATATTGGTACCATCGCCTATGAGTTAGTGAC
TAAACTCACCCCAAGGGTGGCGGTGTGTCTTGCATAA

Protein sequence : 
MKPFPRAEISSSALQNNLAVLRQQASRSQVMAVVKANGYGHGLLNVANCLHTADGFGLARLEEALELRAGGVKARLLLLE
GFFRSTDLPLLVAHDIDTVVHHESQIEMLEQATLSKPVTVWLKVDSGMHRLGVTPEQFAQVYARLTACDNVAKPIHLMTH
FACADEPENNYTQVQMQTFNQLTADLPGFRTLANSAGALYWPKSQGDWIRPGIALYGVSPVTGDCGANHGLIPAMNLVSR
LIAVRDHKAGQPVGYGCYWTAKQDTRLGVVAIGYGDGYPRNAPEGTPVWVNGRRVPIVGRVSMDMLTVDLGADAADQVGD
EALLWGAALPVEEVAEHIGTIAYELVTKLTPRVAVCLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dadX AAC61705.1 alanine racemase Not tested PAI I CFT073 Protein 1e-54 44