Gene Information

Name : Shewmr7_3979 (Shewmr7_3979)
Accession : YP_740013.1
Strain : Shewanella sp. MR-7
Genome accession: NC_008322
Putative virulence/resistance : Virulence
Product : UDP-glucuronate 5'-epimerase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : 5.1.3.12
Position : 4723683 - 4724690 bp
Length : 1008 bp
Strand : +
Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal; KEGG: son:SO4686 NAD dependent epimerase/dehydratase family pro

DNA sequence :
ATGAAATACTTAGTCACAGGCGCCGCCGGATTTATCGGCGCTAAAGTCAGTGAGCGCCTCTGCGCACAGGGCCATGAGGT
TGTCGGTATCGATAACCTCAATGACTATTATGATGTCGGGTTAAAACTAGCACGACTGGCACCGCTCGAGACATTAAACA
ATTTCCGCTTTATCAAACTGGATTTAGCCGACAGAGACGGCATTGCGGCATTGTTTGCAGAACAAGGTTTTCAACGGGTT
ATCCATCTCGCCGCGCAGGCTGGGGTGCGCTACTCCCTCGATAATCCCCTCGCCTATGCCGATAGCAATTTAGTTGGGCA
TCTCACCATTTTAGAGGGCTGTCGCCACCATAAGATTGAGCATCTCGTCTATGCCTCTTCATCCTCTGTGTATGGCTTGA
ATCAAAAGATGCCATTTTCGACCGAGGACAGTGTCGATCATCCGATATCCCTGTACGCAGCGACCAAGAAAGCCAACGAG
TTAATGTCACACACATACTCGCATCTATATCAGTTACCCACCACAGGCCTGCGCTTTTTTACCGTGTATGGCCCCTGGGG
ACGACCCGATATGGCCTTGTTTAAATTCACTAAAGCCATTCTCGCGGGCGACACTATCGATGTGTATAACCATGGCGATC
TCAGCCGTGATTTCACCTATATCGACGATATCGTTGAGGGCATCATCAGGGTACAAGACAAACCTCCTCGCCCCACACCG
GACTGGCGTGTAGAAACTGGTACACCGGCTAATAGCAGCGCACCCTATCGCGTATTTAACATAGGTAATGGCAGCCCAGT
GCAATTGCTGGATTTTATTACCGCACTCGAAAGTGCACTCGGCATTGAGGCTAAAAAGCAATTCTTACCCATGCAGCCCG
GTGATGTACATTCCACTTGGGCCGATACCGAAGATCTGTTTAAGGCGGTGGGATATAAACCCCAAGTGGATATCAATACT
GGGGTGAGTAGATTTGTCGAGTGGTACCGAGCATTTTATGCGAAGTAA

Protein sequence :
MKYLVTGAAGFIGAKVSERLCAQGHEVVGIDNLNDYYDVGLKLARLAPLETLNNFRFIKLDLADRDGIAALFAEQGFQRV
IHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCRHHKIEHLVYASSSSVYGLNQKMPFSTEDSVDHPISLYAATKKANE
LMSHTYSHLYQLPTTGLRFFTVYGPWGRPDMALFKFTKAILAGDTIDVYNHGDLSRDFTYIDDIVEGIIRVQDKPPRPTP
DWRVETGTPANSSAPYRVFNIGNGSPVQLLDFITALESALGIEAKKQFLPMQPGDVHSTWADTEDLFKAVGYKPQVDINT
GVSRFVEWYRAFYAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1I AAA64648.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-101 58