Gene Information

Name : Shewmr7_3978 (Shewmr7_3978)
Accession : YP_740012.1
Strain : Shewanella sp. MR-7
Genome accession: NC_008322
Putative virulence/resistance : Virulence
Product : UDP-glucose/GDP-mannose dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : -
Position : 4722429 - 4723658 bp
Length : 1230 bp
Strand : +
Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: son:SO4687 UDP-glucose 6-dehydrogenase

DNA sequence : 
ATGACGTATTCTATCTCAGCAGAAAATGCTAGTTTGGAAGACAAAATGCCAAACCTTATAAAACCTATGAACATAGTTGT
GGTTGGAATGGGCTATGTCGGCCTATCGAATGCGGTTTTACTCGCACAGCAAAACCGTGTTACCGCTATTGATTTGATGC
CCGAACGTATCGAATTAGTCAATGCGCGCAAAGCGACGGTTGCCGATAGCCTGATTGAAGAATATCTACAGCATAAAACC
TTAAATCTCAGTGCCACGACCGATAAAAACGTCGTTAAAAATGCCGACTTTGTCATCATAGCCACCCCTACGGATTACGA
CCCACAAACCAATTACTTTAATACCCAATCGGTAGAAAATGTCGCGAAGGAAGTGCTCACCCTGAATCCCGATACGACAA
TTGTCATCAAATCGACTGTGCCCGTTGGTTTTACCGAGGGGCTGAGAAATAAGCTCAACAGTGACAATATCTTATTTTCA
CCCGAGTTCCTGCGTGAAGGTAAAGCGCTTTACGATAACCTGCACCCCTCGCGCATCATAGTGGGTGAACGCTCCGAGCG
CGCTCAAGTCTTTGCCGATCTGCTTGCCCGCGCCGCAATCAAGCAAGATATTTCAATTTTACTCACAGACAGCACAGAGG
CCGAGGCGATTAAGTTGTTTGCCAACACTTTTTTAGCCATGCGCGTCGCCTACTTTAATGAGTTGGACACCTATGCGGAG
AGTCGGGGACTCAATACCCGTCAAATTATCGAAGGCGTATGTTTAGATCCGCGCATCGGCGATTACTATAACAACCCTTC
CTTCGGTTATGGCGGTTACTGCCTGCCCAAGGACACTAAACAATTGCTGGCCAACTATAATAATGTGCCTAACAATCTGA
TCAGCGCCATTGTCGATTCCAACACCACCCGTAAAGATTTTATTGCCAACGCCATTATCAGTAAGCAACCCAAACGGGTC
GGCATCTATCGTTTGATCATGAAGTCCGACTCGGATAACTTCCGCGCCTCGGCGGTACAAGGTGTAATGAAACGCATTAA
GGCCAAGGGCATCGAAGTCGTGGTCTATGAGCCAGTACTCAAGGAAGACGAGTTTTTTAACTCGAAAGTGATCCGCGATT
TACACGAATTTAAAACCATGTGCGACGTGATTATTTCTAATCGTATGGCCAGTGAACTCGAAGATGTCGCCGCTAAGGTG
TACACCCGGGATCTGTTCCATCACGACTAA

Protein sequence : 
MTYSISAENASLEDKMPNLIKPMNIVVVGMGYVGLSNAVLLAQQNRVTAIDLMPERIELVNARKATVADSLIEEYLQHKT
LNLSATTDKNVVKNADFVIIATPTDYDPQTNYFNTQSVENVAKEVLTLNPDTTIVIKSTVPVGFTEGLRNKLNSDNILFS
PEFLREGKALYDNLHPSRIIVGERSERAQVFADLLARAAIKQDISILLTDSTEAEAIKLFANTFLAMRVAYFNELDTYAE
SRGLNTRQIIEGVCLDPRIGDYYNNPSFGYGGYCLPKDTKQLLANYNNVPNNLISAIVDSNTTRKDFIANAIISKQPKRV
GIYRLIMKSDSDNFRASAVQGVMKRIKAKGIEVVVYEPVLKEDEFFNSKVIRDLHEFKTMCDVIISNRMASELEDVAAKV
YTRDLFHHD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 3e-94 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shewmr7_3978 YP_740012.1 UDP-glucose/GDP-mannose dehydrogenase VFG0963 Protein 2e-98 54