|
Name : Shewmr7_3672 (Shewmr7_3672) Accession : YP_739709.1 Strain : Shewanella sp. MR-7 Genome accession: NC_008322 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 4373736 - 4375826 bp Length : 2091 bp Strand : + Note : catalyzes branch migration in Holliday junction intermediates DNA sequence : TTGAGCGCTAACGACTTGCAGCAATTGGATCTTGTTCCGATCACCGACCTCAAAGGCGTCGCCAAAAGGGTGGCGGAAAA ACTCGCAAAGCTCGGCATCACAACAGTACAAGATCTGCTGTTTCACTTACCCCTGCGCTACGAAGACCGCACTCAGATTT ATCCTATTGCCGCCTTAATGCCGGGAAATTACGGCACCATTGAAGCCGAAATCCAGTCGACACAAATCATTCAAGGCCGC AAACGCATGCTGGTGTGCAATGTGCGGGATAATACTGGCAGCATGAGCCTACGCTTCTTTAACTTTTCGATGGCGCAACG CAATGCGATGCAAAATGGCTTAATGATCCGCGCCTACGGTGAAATTCGCCGTGGCAATCATCAGGCTGAAATCGTCCATC CCGAATACAAAATTGTGTATCCCGGTGAAGATATTCATTTAAGCGATACCCTTACGCCGATTTATCCCACTACGGAAGGA CTCAAACAGGCGAGTTGGATCAAGCTCACCGAGCAAGCCCTCGAATTATTAGAAGACGGCGGTTTGACCGAGTTATTACC CGCCAATTTGCAGCCCAACAGCATGAGCCTGAAACAAGCACTGCAAACCCTACATCGCCCCCACGCGGGAATATCACAAT TTGACTTAGAGCTCGGCCAGCATCCGGCGCAGCAACGGCTGGTGCAGGAAGAACTGCTCGCCCATAACCTCAGCATGCTC CGCCTCAGGCAGCGCAGTAATCTCGACGCAGCCGTAACCATGCACGCCAGCGGCCAACTATTGAATCCCTTTCTCACCTC ATTGCCCTTTAAACCGACGGGCGCCCAGGAAAGAGTCGTCGCCGAGATTGGTAAAGACTTAGAGCAACCGCACCCCATGA TGCGTTTAGTTCAAGGTGATGTGGGTTCGGGTAAAACCTTAGTCGCCGCCCTCGCCGCCTTGCAAGCCATCGAAAATGGT TACCAAGTGGCCATGATGGCGCCTACCGAATTACTCGCCGAGCAGCATGCGGCTAACTTTGCCGCCTGGTTTGAACCCTT GGGATTAAAAGTCGGATGGCTGGCGGGCAAACTTAAAGGCAAGGCGCGGGCGCAATCCTTAGCCGATATTGAATCGGGCG ATGCACAAATGGTGATAGGCACCCATGCTATCTTCCAGCAGCAGGTCACTTTCAACAAACTGGCCTTGATCATTATTGAT GAGCAGCACAGGTTCGGGGTTCACCAACGGATGGGACTCAGGGAAAAAGGCATTAACCAAGGCTTTCATCCCCATCAGTT AATTATGACGGCAACGCCCATCCCACGCACCTTAGCCATGACGGCCTACGCCGATTTGGACACCTCGATTATCGATGAGT TGCCGCCCGGCCGCACACCTGTGACCACAGTCGCCATCCCCGATTCGCGTCGCAATGAAGTGCTCGAGCGCGTCCGTAAC AGCGTAGTCACGGATAAACGCCAAGCCTATTGGGTCTGTACTCTGATTGAAGAATCTGAAGTTCTCGAGTGCCAAGCGGC GGAAGATACCGCCGAAGAGTTACGCCAAGCGCTGCCGGAACTGAGCATAGGTTTAGTCCACGGCCGGATGAAAAGTGCTG AAAAGCAAAAAATTATGGCCGACTTCAAGGCGGGAACTATCCATTTATTGGTGGCAACCACAGTGATTGAAGTCGGTGTC GACGTACCCAACTCCAGCTTAATGATTATCGAAAACCCAGAGCGGCTTGGCCTAGCACAGCTGCACCAACTGCGGGGCCG CGTAGGGCGCGGTGCCGTGGCGAGCCATTGTGTGTTACTCTACAAAGCGCCATTGAGCCAAACCGCAAGCCAGCGGTTGA ATGTGCTCAGGCAAAGTAATGATGGTTTTGTGATTGCACAGAAAGACTTAGAGATCCGTGGGCCGGGCGAAGTACTAGGC ACTAAGCAAACGGGACTGGCCGAGCTGAAAATCGCCGACCTTGTCCGCGATCAGGCGCTCATCCCACATATCCAAAAACT GGCGAGCCATGTGATGTCACAGGCACCAGAGGCGGTCGATGCCATTATTCATCGCTGGCTTGGACACAGGCAACAATATG TTCAGGCCTAA Protein sequence : MSANDLQQLDLVPITDLKGVAKRVAEKLAKLGITTVQDLLFHLPLRYEDRTQIYPIAALMPGNYGTIEAEIQSTQIIQGR KRMLVCNVRDNTGSMSLRFFNFSMAQRNAMQNGLMIRAYGEIRRGNHQAEIVHPEYKIVYPGEDIHLSDTLTPIYPTTEG LKQASWIKLTEQALELLEDGGLTELLPANLQPNSMSLKQALQTLHRPHAGISQFDLELGQHPAQQRLVQEELLAHNLSML RLRQRSNLDAAVTMHASGQLLNPFLTSLPFKPTGAQERVVAEIGKDLEQPHPMMRLVQGDVGSGKTLVAALAALQAIENG YQVAMMAPTELLAEQHAANFAAWFEPLGLKVGWLAGKLKGKARAQSLADIESGDAQMVIGTHAIFQQQVTFNKLALIIID EQHRFGVHQRMGLREKGINQGFHPHQLIMTATPIPRTLAMTAYADLDTSIIDELPPGRTPVTTVAIPDSRRNEVLERVRN SVVTDKRQAYWVCTLIEESEVLECQAAEDTAEELRQALPELSIGLVHGRMKSAEKQKIMADFKAGTIHLLVATTVIEVGV DVPNSSLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKAPLSQTASQRLNVLRQSNDGFVIAQKDLEIRGPGEVLG TKQTGLAELKIADLVRDQALIPHIQKLASHVMSQAPEAVDAIIHRWLGHRQQYVQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 2e-102 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Shewmr7_3672 | YP_739709.1 | ATP-dependent DNA helicase RecG | BAC0356 | Protein | 0.0 | 59 |
