|
Name : Shewmr7_3250 (Shewmr7_3250) Accession : YP_739290.1 Strain : Shewanella sp. MR-7 Genome accession: NC_008322 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 3851712 - 3853706 bp Length : 1995 bp Strand : - Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : ATGTCTTCCCGTAAAGTACTCGCCAACGCAATCCGTGCGTTAAGTATGGATGCAGTTCAAAAAGCAAACTCAGGCCACCC TGGCGCCCCAATGGGCATGGCAGATATTGCTGAAGTGCTGTGGAATGATTTCCTTAAGCACAATCCGAACAATCCGAAAT GGGTAGATAGAGATCGTTTTATCCTCTCTAACGGTCACGGATCTATGCTGATCTACTCTTTATTACACCTGACTGGCTAC GACCTGCCTATCGATGAACTGAAGCAATTCCGTCAGTTACATTCAAAAACTCCGGGTCACCCAGAATACGGTTACACCCC AGGTGTTGAAACCACCACAGGCCCATTAGGGGCGGGGATCAGCAACGCTGTGGGTATGGCGATTGCAGAAAAAACCTTAG CGGCACAGTTTAACCGTGAAGGTCACGAGATTGTTGACCACTACACTTACTGCTTCCTCGGCGATGGCTGCTTGATGGAA GGTATTTCCCACGAAGCTTGTTCTCTGGCTGGTACCTTAGGCCTAGGCAAACTGATCGCATTTTGGGATGACAACGGCAT ATCTATCGACGGTCATGTTGAAGGCTGGTTTACCGATGACACTCCAAAACGTTTCGAATCATACGGCTGGCATGTGATTG CTAACGTTGATGGTCACGATAGCGATGCGATTCGCGCGGCTATCGAAGCGGCAAAAGCGGTGACCGACAAGCCAACCATG ATCTGCTGCAAAACCATTATCGGTTTTGGTTCACCAAACAAATCTGGTAGCCACGATTGCCACGGCGCGCCATTAGGTGA TGCGGAAATCGCAGCGGCCCGTGAATTCTTAGGCTGGCCACATGCGCCATTCGAAATCCCTGCCGACGTATACGCAGGTT GGGATGCTAAAGAAGCCGGTAACGCCCGTGAAGCAGCATGGAATGACAAGTTTACCGCTTACGCGAAAGCTTACCCAGAA CTGGCTGCCGAATACGAGCGCCGCGTTCTGAAAGGTGAATTACCAGCAGATTTCGAAGCCAAAGCACAAGCCTTTATCCA AGAATGCCAAGCGAAAGGCGAAGGCATTGCGAGCCGTAAAGCGTCACAAAACGCGATTGCAGCCTTCGGTGCGGTTCTGC CTGAACTGTTAGGCGGCAGTGCTGACTTAGCGGGTTCTAACCTGACCTTGTGGGCAGGTTCTAAAGGCATTCAAGAAGAT CCAGCGGGTAACTACGTGTACTACGGTGTGCGTGAGTTCGGTATGAGCGGCATCATGAACGGTGTGTCACTCCACGGTGG TTTCATCAACTACGGCGCGACTTTCATGATGTTCATGGAATACGCACGTAATGCAGTACGTATGTCTGCGCTGATGGGCA TTCAAAACATCTTCGTTTATACCCATGACTCTATCGGTCAAGGTGAAGATGGTCCAACTCACCAACCAGTTGAGCAATTA GCTAACCTGCGTATGACGCCAAATATGGCGGTATGGCGCCCATGTGACGCTGCTGAAACTGCAGTGGCTTGGAAAGCGGC TATCGAACGTCGTCATGCACCAACATCGCTAGTATTCAGCCGTCAAAACCTGAAGGCTCACGCACGTACTGCTGAGCAAT TAGCGAATGTGGCAAAAGGCGCTTACGTACTGCAAGACTGTGCAGGTACACCTGAGTACATCCTGATTGCGACCGGTAGT GAAGTGCAATTAGCGGTAGAAGCTGCAGCTGCGCTGACCGAACAAGGCAAACAAGTTCGCGTTGTTTCTATGCCATCAAA CACTGAGTTTGATAAGCAAGATGCTGCTTACAAAGAATCTGTACTGCCAAAAGCTGTGACTAAGCGTATCGCTATCGAAG CGGCCCATACTGACTTCTGGTACAAGTATGTTGGTTTCGAAGGCACTGTTGTTGGCATGACCACTTTCGGTGAGTCTGCG CCAGGCAACGTGCTGCTGAAGCACTTCGGTTTCACCGTTGAAAATGTGCTGAATGCTGCAAAATCACTAGGCTAA Protein sequence : MSSRKVLANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWNDFLKHNPNNPKWVDRDRFILSNGHGSMLIYSLLHLTGY DLPIDELKQFRQLHSKTPGHPEYGYTPGVETTTGPLGAGISNAVGMAIAEKTLAAQFNREGHEIVDHYTYCFLGDGCLME GISHEACSLAGTLGLGKLIAFWDDNGISIDGHVEGWFTDDTPKRFESYGWHVIANVDGHDSDAIRAAIEAAKAVTDKPTM ICCKTIIGFGSPNKSGSHDCHGAPLGDAEIAAAREFLGWPHAPFEIPADVYAGWDAKEAGNAREAAWNDKFTAYAKAYPE LAAEYERRVLKGELPADFEAKAQAFIQECQAKGEGIASRKASQNAIAAFGAVLPELLGGSADLAGSNLTLWAGSKGIQED PAGNYVYYGVREFGMSGIMNGVSLHGGFINYGATFMMFMEYARNAVRMSALMGIQNIFVYTHDSIGQGEDGPTHQPVEQL ANLRMTPNMAVWRPCDAAETAVAWKAAIERRHAPTSLVFSRQNLKAHARTAEQLANVAKGAYVLQDCAGTPEYILIATGS EVQLAVEAAAALTEQGKQVRVVSMPSNTEFDKQDAAYKESVLPKAVTKRIAIEAAHTDFWYKYVGFEGTVVGMTTFGESA PGNVLLKHFGFTVENVLNAAKSLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 0.0 | 74 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 0.0 | 67 |
