Gene Information

Name : Shewmr7_3008 (Shewmr7_3008)
Accession : YP_739049.1
Strain : Shewanella sp. MR-7
Genome accession: NC_008322
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase (acceptor)
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.99.3
Position : 3564296 - 3565792 bp
Length : 1497 bp
Strand : -
Note : PFAM: aldehyde dehydrogenase; KEGG: son:SO3496 aldehyde dehydrogenase

DNA sequence :
ATGAGTACACCTAAAAAACGGAGTGATTGGGAAAGCCTCGCTGCTAGCCTAGCAATCAATGGCAAGGCTTATATCAATGG
CGAATACCGCGATGCGGCAGCGGGCAGCACCTTTGATTGTGTCAGCCCAATCGACGGACGCGTATTAGCCAAGGTCGCCA
GTTGCGATCTGATGGACGCCAATATTGCCGTCGCTAATGCCCGTGAGGTGTTTGAATCTGGCGTATGGTCAAAGACAGCT
CCCGTTAAACGTAAGCAAGTGATGATCCGTTTTGCCGAGTTATTGGAAGAAAATGCCAATGAACTCGCCCTGTTAGAAAC
CTTGGACATGGGTAAGCCAATCCGTTTTTCAAAGGCGGTAGATATTACTGGCGCCGCCCGTGCTATCCGTTGGTCGGGTG
AGGCCGTTGATAAACTCTACGATGAGCTGGCACCTACGGCACATAATGAAATCGGCATGATCACCCGCGAACCCGTAGGC
GTGGTGGCGGCGATTGTACCTTGGAACTTCCCGTTATTGATGGCTTGTTGGAAGCTGGGGCCAGCGCTGGCGACGGGCAA
CAGCGTTATTCTTAAACCCTCTGAGAAATCCCCCTTAACGGCCATTCGTATCGCTGAACTTGCGGTACAGGCAGGGATCC
CTAAGGGCGTGCTAAACGTACTGCCGGGTTATGGGCATACGGTCGGTAAGGCACTGGCGCTGCATATGGATGTCGATAGC
TTAGTCTTTACGGGTTCAACAAAAATCGCTAAGCAATTAATGATTTATGCGGGCGAATCGAATATGAAGCGGGTGTGGCT
CGAGGCGGGGGGGAAGAGTCCGAACATTGTATTTAACGATGCGCCCGATCTTAAAGCGGCGGCGGTGGCGGCGGCCGAAG
CCATTGCTTTTAACCAAGGTGAAGTCTGTACCGCAGGCTCGCGTTTGCTGGTGGAGTCTGGGGTTAAAGATCAATTGATT
GCGCTGATTGCTGAAGAACTCACCTCGTGGCAGCCTGGGCATCCGCTGGATCCCACAACCGTTAGCGGCGCTGTGGTCGA
TAAGCAGCAATTAGATACCATCTTAAGCTATATCAAGGCGGGCCAAGACGAAGGCGCCAGTTTAGTCCATGGTGGACAGC
AAGTGCTGGCCGAAACGGGCGGCGTGTATGTGCAACCCACTATCTTTAGCCAAGTGCACAACAAGATGAAAATCGCCAGC
GAGGAAATCTTTGGCCCTGTGTTATCTGTCATTGAATTCAATGGCATGGAAGAGGCGATTGCGATAGCCAATGACACTAT
TTACGGCTTAGCGGCAGGGGTGTGGACGGCGGATATCAGCAAGGCGCACAAAACCGCCAAGGCTCTGCGCTCGGGAATGG
TGTGGATTAACCATTATGATGGTGGCGATATGACGGCGCCTTTCGGTGGTTACAAACAATCGGGCAATGGCCGCGATAAA
TCCATGCACTCCTTCGATAAATACACCGAAATCAAGGCGACTTGGATAGCCCTCTAA

Protein sequence :
MSTPKKRSDWESLAASLAINGKAYINGEYRDAAAGSTFDCVSPIDGRVLAKVASCDLMDANIAVANAREVFESGVWSKTA
PVKRKQVMIRFAELLEENANELALLETLDMGKPIRFSKAVDITGAARAIRWSGEAVDKLYDELAPTAHNEIGMITREPVG
VVAAIVPWNFPLLMACWKLGPALATGNSVILKPSEKSPLTAIRIAELAVQAGIPKGVLNVLPGYGHTVGKALALHMDVDS
LVFTGSTKIAKQLMIYAGESNMKRVWLEAGGKSPNIVFNDAPDLKAAAVAAAEAIAFNQGEVCTAGSRLLVESGVKDQLI
ALIAEELTSWQPGHPLDPTTVSGAVVDKQQLDTILSYIKAGQDEGASLVHGGQQVLAETGGVYVQPTIFSQVHNKMKIAS
EEIFGPVLSVIEFNGMEEAIAIANDTIYGLAAGVWTADISKAHKTAKALRSGMVWINHYDGGDMTAPFGGYKQSGNGRDK
SMHSFDKYTEIKATWIAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 3e-118 55
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-72 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-73 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-73 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-73 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-73 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shewmr7_3008 YP_739049.1 aldehyde dehydrogenase (acceptor) VFG0082 Protein 1e-72 41