Gene Information

Name : Shewmr7_1935 (Shewmr7_1935)
Accession : YP_737981.1
Strain : Shewanella sp. MR-7
Genome accession: NC_008322
Putative virulence/resistance : Unknown
Product : aminotransferase AlaT
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0436
EC number : 2.6.1.-
Position : 2286467 - 2287681 bp
Length : 1215 bp
Strand : -
Note : broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor

DNA sequence :
ATGCGCCCTATCATCAAGTCCAACAAGTTGGATACTGTTTGCTACGACATCCGCGGCCCAGTGCACAAGGAAGCCAGACG
TTTAGAAGACGAGGGACACCGCATCCTCAAACTCAACATTGGTAACCCCGCCCCCTTCGGTTTTGAAGCGCCGGAAGAAA
TTGTGCGCGATGTGATCCTCAATCTTCCCAGCGCCCAAGGCTACTGTGAGTCGAAAGGATTATTCTCTGCCCGCAAGGCG
ATTGTGCAGCATTATCAAGCTCAAGGAATTTTTGGTGTTGATATTGAAGATATCTATATAGGCAACGGCGTCTCTGAACT
TATTATGATGGCGATGCAAGGTCTGCTTAACACAGATGATGAGATCTTAATCCCCTCGCCTGACTATCCATTATGGACAG
CGGCGGCCAATCTCGCCGGCGGTAAAGCGGTGCATTACCGTTGTGATGAAGACGCGGATTGGTTCCCCGATCTTGATGAT
ATTAAGAGCAAAATTTCATCTCGCACCCGCGGTATTGTATTGATCAACCCGAACAATCCTACTGGCGCGGTTTACAGCAA
AGAATTACTGCTGCAAGTTGTCGAGCTTTGCCGCGAGCACAACCTGATCCTGTTTGCCGATGAAATCTACGATAAGATTT
TATACGACGAGGCCAAACATATTCCGGCCGCGAGCCTCTCTGACGATATCTTAACCGTGACCTTTAATGGTCTATCAAAG
GCTTATCGCGCTGCGGGCTTTCGTGTTGGTTGGATGATGTTGTCTGGTAATCTTAAGGCTGCAAAGAGTTATATCGAAGG
TTTAGAGATGCTCTCCTCGATGCGCCTGTGTGCCAACGTGCCGAATCAACATGCGATTCAAACCGCGCTCGGCGGTTACC
AAAGCATTAATGAGCTGATTTTACCTAGTGGCCGCTTAACCGTGCAGCGCGATACCTGTTATGAGTTATTGAACCAAATT
CCCGGTGTGAGCGTGAAAAAGCCGAAGGGTGCACTCTATGCTTTCCCTAAATTGGATATGAAAAAATTCAACCTTAGGGA
TGATGAGCGCTTAGTCCTCGATTTACTCAGAGAAAAGAAAATCCTGTTAGTACACGGCAGTGCCTTTAACTGGCCAGAGC
CGGATCACCTCAGGGTGGTATTTTTACCCTATAAAGAAGATTTGACTAAGGCATTGACTGAGTTTGGCCATTTCCTCGAG
ACCTATAAACAATAA

Protein sequence :
MRPIIKSNKLDTVCYDIRGPVHKEARRLEDEGHRILKLNIGNPAPFGFEAPEEIVRDVILNLPSAQGYCESKGLFSARKA
IVQHYQAQGIFGVDIEDIYIGNGVSELIMMAMQGLLNTDDEILIPSPDYPLWTAAANLAGGKAVHYRCDEDADWFPDLDD
IKSKISSRTRGIVLINPNNPTGAVYSKELLLQVVELCREHNLILFADEIYDKILYDEAKHIPAASLSDDILTVTFNGLSK
AYRAAGFRVGWMMLSGNLKAAKSYIEGLEMLSSMRLCANVPNQHAIQTALGGYQSINELILPSGRLTVQRDTCYELLNQI
PGVSVKKPKGALYAFPKLDMKKFNLRDDERLVLDLLREKKILLVHGSAFNWPEPDHLRVVFLPYKEDLTKALTEFGHFLE
TYKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 2e-112 58
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 2e-112 58
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 2e-112 58
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 2e-112 58