Gene Information

Name : Shewmr7_1786 (Shewmr7_1786)
Accession : YP_737836.1
Strain : Shewanella sp. MR-7
Genome accession: NC_008322
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1479
EC number : -
Position : 2106385 - 2108334 bp
Length : 1950 bp
Strand : +
Note : PFAM: protein of unknown function DUF262; KEGG: vch:VC1766 hypothetical protein

DNA sequence :
ATGAGTTCAAAAGTTGAGACGGAGCTGCTTTCATTACAAACTATCGCGACAAAAGATTTGGGCTTCGTTATTCCTTGCTA
TCAGCGTCCTTACGTTTGGCGTGAAGAAGAAGTGATCAAGTTATTTGACGACATTCGCGATGCTTATTTGGCTAAAGAGC
CCCACTACTTTATTGGTAGTGTTTTGAGTGCGTTAAATGGTGATAAAAGCGAATATGAGCTGATCGATGGGCAGCAAAGA
ACCACAACATTGATGTTGTTATCACTTGCCTTCAAGGCTGTAGGGATTGAGACTCAGCTGGCTCATGTGAGTATCAAAGG
TGAAAATCCAAGGTTAACGTTCGAAATCAGAGAGTCAGTGCGGAACTTGCTTGGCAGCTACGCGGGACTGGACAAAATTA
CGAAACCCGGTGCAGAAGATATTCGCAAAGATGAGTACCTAGTACATTTAGAAGCCAATCTTACTATTTTGAAGCAGCAA
GTCGATAAGTTAGCAGAGCAATCAGACTTCGATATCCATGGTTTTGCTGACTACATTTTTAATCAAGTGCAATGGGTAAA
TAATATTGTTCCAGCATCTATGGATCTGAACCGATTGTTTTCGAGTTTAAATACAGGTGGCATACAGCTAGAACCAGTTG
ATTTATTGAAAGCAAAGTTGTTCAAACACATAACAACAGATAAAGTCGTTTACAGCAGTATTTGGCAAGCGTGTGAACAT
ACCGATAACTATTTTGAGCGCAATCTGAGACAGATATTCAAAAATGCCGACTGGCAAACTCTGGAGTATACCGATCTTGC
CAACTATCAGGCAGAGCTATTTCCTCTAGTCAGCTCTAGTAATAGTGTTCAACGAGTTGGTAAGTCAATTGCTGAGATAG
GATCTGGATCATTGGACTATGATGTCGAACCTGAACAATCTGAAAGTCAAAGCGATGATTTTGACGATGAGACCGTTTAT
TGTCGTTCAATTATCAGTTTTGAGTTGCTATTGATTCATACACTCAGAATTTTTTGTACCCAGAAATCGTGGGATGATCT
CACTCCTCGTATCCGCGCTAGCAATCTGATGTTGTGTTTTGAAAGGTTACTACAACATGATGAACGAACCATTAAATCGT
TTATCGAGTTGTTATGGCAGGTTCGGTATCAGTTCGATACCTGGGTTGTGAAATGGGTCGAGCATGATGATAGAGAAGAT
GCGCAGTTACGTTTAACTTCGATTAGTAAGAATAAAGCCTATATCAACCGTAAAGCTAAAGAGCTTGGTTTACTGGCACA
ATTGCAAGCCGTGCGAAACTTTACTGGTGATCGCTCAGCCCAGTATTGGTTAACAGCGTTTTTATGTCGATTGGTTGCTG
ATCCGAAAGCGAATGATGAAGACGTGGTTACGCTATTGGAGAGCATCGACAATAAAATGTCGCTTACTAGGGAAACGCAA
AAAGAAGCTAGCTTTAAACTTGCATCTGACATTTCGCCACAAACGATCCCTTGGGAAGATCAAGCTATCTATCTTAAAAG
TTCTTTGGGAACTCGATTCGAACATTATTGGTTTCAGAAGCTGGAATACTTACTCTGGAAAAAAGGTGATAAAACCAATG
ATGATAAGTTAAAACGTTATCGGATCACTTCGAAAAATTCGGTTGAGCACGTTCATCCTCAAAATGAAGAGTACCATCAT
GAGCTAGAAAAGAGCCCATTAAATGCTTTTGGTAATTTAGTGCTTCTAAGCCCAGGTGAAAACTCATCATATAGCAACCA
AACGGTAGCAAAGAAAAAAGCGGATTTTGATTCTAAGCCGCGTTATGACGCGTTAAAGCTGAAAGATATTTTTGAGACGT
ACACACAATCAAATAGCCAATGGTCAGCTATCGAAATAGATAAACATCAGCAAAACATGTTGAAATTATTGGAAAAACAT
TACATGGAAGGAGTAGTCAATGGTCAGTAG

Protein sequence :
MSSKVETELLSLQTIATKDLGFVIPCYQRPYVWREEEVIKLFDDIRDAYLAKEPHYFIGSVLSALNGDKSEYELIDGQQR
TTTLMLLSLAFKAVGIETQLAHVSIKGENPRLTFEIRESVRNLLGSYAGLDKITKPGAEDIRKDEYLVHLEANLTILKQQ
VDKLAEQSDFDIHGFADYIFNQVQWVNNIVPASMDLNRLFSSLNTGGIQLEPVDLLKAKLFKHITTDKVVYSSIWQACEH
TDNYFERNLRQIFKNADWQTLEYTDLANYQAELFPLVSSSNSVQRVGKSIAEIGSGSLDYDVEPEQSESQSDDFDDETVY
CRSIISFELLLIHTLRIFCTQKSWDDLTPRIRASNLMLCFERLLQHDERTIKSFIELLWQVRYQFDTWVVKWVEHDDRED
AQLRLTSISKNKAYINRKAKELGLLAQLQAVRNFTGDRSAQYWLTAFLCRLVADPKANDEDVVTLLESIDNKMSLTRETQ
KEASFKLASDISPQTIPWEDQAIYLKSSLGTRFEHYWFQKLEYLLWKKGDKTNDDKLKRYRITSKNSVEHVHPQNEEYHH
ELEKSPLNAFGNLVLLSPGENSSYSNQTVAKKKADFDSKPRYDALKLKDIFETYTQSNSQWSAIEIDKHQQNMLKLLEKH
YMEGVVNGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A1364 YP_001217307.1 hypothetical protein Not tested VPI-2 Protein 5e-160 51
VC1766 NP_231401.1 hypothetical protein Not tested VPI-2 Protein 1e-160 51
VPI2_0014c ACA01831.1 hypothetical protein Not tested VPI-2 Protein 9e-158 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shewmr7_1786 YP_737836.1 hypothetical protein VFG1099 Protein 6e-161 51