Gene Information

Name : Shewmr7_1783 (Shewmr7_1783)
Accession : YP_737833.1
Strain : Shewanella sp. MR-7
Genome accession: NC_008322
Putative virulence/resistance : Virulence
Product : restriction modification system DNA specificity subunit
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0732
EC number : -
Position : 2102612 - 2103958 bp
Length : 1347 bp
Strand : +
Note : PFAM: restriction modification system DNA specificity domain; KEGG: vch:VC1768 putative type I restriction enzyme, S subunit

DNA sequence :
ATGACAAATTTATCGGGAGTAAATTTGAACAATGGCTCTGCCGTTGGCGCAAAGAGCGAGGGCATGGACAGCCCGAGTCA
TAGTTTAGCCTTGATGCCGAAATATGAGGCTTATAAAGATTCAGGTGTTGAATGGCTAGGGGATATTCCACAAAATTGGA
AAGTAATGCGCTTTAAGTTTTTAGCTTCAATTACTACTGGGGGAAAAAATACTGAAGATAAGACTGGTACTGGTAAATAC
CCATTCTTTGTTCGTTCACAAATACCAGAGAAAATAGATAGTTATTCATATGATGGTGAAGCAATTCTTACTGCTGGGGA
TGGCGCTGGTGTAGGAAAAGTCTATCACTATATTAATGGCAAATTTGATTTTCATCAGCGAGTCTACAAATTTTCTGATT
TTAATGAAGTTATCGGGCAATATCTATTTCATTACCTTTACGTAAATTTCTTTAATGTGGCGGTATTAGGTACGGCAAAG
TCTACAGTTGATAGTCTCCGTTTACCTCTAATCCAAGACTTTCAAGTCTGCTACCCTAGTGATAATTGGCAACAACAATT
AATAGTTTCATATATTAATAAAAAGGCAGCTCAAATCGACGATGCAATTGCTATCAAAGAGCAGCAAATTAGCCTGTTGA
AAGAGCGTAAGCAGATCATCATCCAACAGGCTGTGACCCAAGGGCTTGATCCCAATGTGCCAATGAAAGATTCCGGTGTG
GATTGGATTGGCAAGATTCCGGCACATTGGGAGGTTAGAAGAGCGAAGTATATTTTTGATGAAATTGATGAACGCTCTAA
AAACGGCGATGAAGAGTTGTTGTCTGTTTCACACATGACGGGAGTTACTCCTCGATCTGAAAAGAACGTATCGATGTTTA
TGGCAGAGGATTACACCGGTTCAAAGCTTTGTATAGAAAACGATTTAGTTATTAATATCATGTGGGCATGGATGGGTGCG
CTGGGAGTTTCCGACCGTGTTGGCATAGTTAGTCCTTCATACGGAGTATTCCGGCAAAAACTAAAAAATACATTCAATCC
TACTTATTTAGAGTATCTGTTAAAAAGCGTTAAATACGTAGAGTACTACAACAAGGTTTCAACAGGGCTGCATTCCTCTA
GACTTCGATTTTATGGGCATATGCTTTTTGCTATGAAAATGGGTTATCCAAGTTATGAAGAGCAAAATGAAATTATGGCA
TATCTACACGAGCAGACTAAGAGAATTGACTTGGCGATAGATTCTCAGCTGGCGCAAATCGAAAAACTCAAAGAATACAA
AACTACCCTGATCAACAGCGCCGTGACAGGAAAAATAAAAATCACCCCGGAAATGGTTGAGCAATAG

Protein sequence :
MTNLSGVNLNNGSAVGAKSEGMDSPSHSLALMPKYEAYKDSGVEWLGDIPQNWKVMRFKFLASITTGGKNTEDKTGTGKY
PFFVRSQIPEKIDSYSYDGEAILTAGDGAGVGKVYHYINGKFDFHQRVYKFSDFNEVIGQYLFHYLYVNFFNVAVLGTAK
STVDSLRLPLIQDFQVCYPSDNWQQQLIVSYINKKAAQIDDAIAIKEQQISLLKERKQIIIQQAVTQGLDPNVPMKDSGV
DWIGKIPAHWEVRRAKYIFDEIDERSKNGDEELLSVSHMTGVTPRSEKNVSMFMAEDYTGSKLCIENDLVINIMWAWMGA
LGVSDRVGIVSPSYGVFRQKLKNTFNPTYLEYLLKSVKYVEYYNKVSTGLHSSRLRFYGHMLFAMKMGYPSYEEQNEIMA
YLHEQTKRIDLAIDSQLAQIEKLKEYKTTLINSAVTGKIKITPEMVEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1768 NP_231403.1 hypothetical protein Not tested VPI-2 Protein 7e-90 53
VC0395_A1366 YP_001217309.1 hypothetical protein Not tested VPI-2 Protein 9e-90 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shewmr7_1783 YP_737833.1 restriction modification system DNA specificity subunit VFG1101 Protein 3e-90 53