Gene Information

Name : Shewmr7_1765 (Shewmr7_1765)
Accession : YP_737815.1
Strain : Shewanella sp. MR-7
Genome accession: NC_008322
Putative virulence/resistance : Virulence
Product : phage transcriptional regulator, AlpA
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 2086443 - 2086655 bp
Length : 213 bp
Strand : +
Note : PFAM: Prophage CP4-57 regulatory; KEGG: ecj:JW2604 DNA-binding transcriptional activator

DNA sequence : 
ATGGAACCCAACATCCCAAGCTTCACCATCATCAGATTAAAGAAAGTCATGGATTTGACTGGCCTGTCTCGTTCAACCAT
ATACGACAAAATAAATCCCGCGTCTCCACGTCATGACCCACTTTTTCCGCGAAAAGTAGGTCTTGGTGCTCGTGCCGTTG
GTTGGTACATGCAAGAAGTCGAACAGTGGCTGCAAGCACGTAAGTGCTGCTGA

Protein sequence : 
MEPNIPSFTIIRLKKVMDLTGLSRSTIYDKINPASPRHDPLFPRKVGLGARAVGWYMQEVEQWLQARKCC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 2e-08 47
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 4e-07 43
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 4e-07 43
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 3e-07 43
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 3e-06 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shewmr7_1765 YP_737815.1 phage transcriptional regulator, AlpA VFG1118 Protein 1e-07 43