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Name : Shewmr7_1424 (Shewmr7_1424) Accession : YP_737480.1 Strain : Shewanella sp. MR-7 Genome accession: NC_008322 Putative virulence/resistance : Virulence Product : two component, sigma54 specific, Fis family transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2204 EC number : - Position : 1652063 - 1653442 bp Length : 1380 bp Strand : - Note : PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: son:SO3138 C4-dicarboxylate transport transcriptiona DNA sequence : ATGAGTCTGCCCAATTCAATTCAAGACTATAGCGTACTGATCATCGACGATGAGCCCCATATAGGCACAGTGCTCGTGCA GCTTTTTGAGCTGGAAGGCATTAAAGCCTTCGCCACTACCGATCCCAAAGGGATAGCCAAATTGCTCGACAGGGACTGGG CGGGCGTGGTGATTTCCGATGTGAATATGCCGCAGCTCGATGGCATCAGTTTGATGCAGCAAATTCGTCAGCAGGATCCC GATTTACCCGTCGTACTACTCACCGGCTTTGGCGATATCGCCATGGCGGTCAATGCGTTAAAACAAGGGGCCTACGATTT TCTCGAAAAACCCTTTAACAATGAACACATGCTAGATGTGGTGAAGCGCGCCTTAGATAAACGTAGCCTCACCTTAGAGA ACCGTAAATTAAAGAAAGAGTTAGAAAGCCATAACGTGCCAGGCCCAAGAATATTAGGCCACAGCGTCGGCATTTTGCGT ATGCGTCACATCATAGACCAAGTGATCGACACCCCTGCCGATGTGCTTATCGAAGGTGAAACCGGTACGGGTAAGGAATT GGTCGCCCGCTATCTGCACGACCACAGCAGTCGCAATCAAGCCAACTTTGTGGCGATTAACTGCGGTGCGATTCCCGAAA ACTTGATTGAAAGCGAGCTATTTGGCGCCGAAGCTGGTGCCTTTACCGGGGTCGATAAACTGCGTGTCGGTAAGTTTGAA TACGCCAATGGCGGCACACTCTTTTTAGATGAAATCGAAAGTACGCCGCTGTCGTTACAGGTCAAACTGCTGCGGGTGCT CGAAGATCGCAAGGTCGAACGCCTAGGCTCCAATAAAAGCATTAATTTGGATATTCGGGTAATTGCCGCCACTAAGGTGG ATTTAAAGTCCCTGTGCGACACCGGAGAGTTTCGCCAAGACTTGCTCTATCGCTTAAATCTGGTGACAGTGCCCATTCCA CCACTCAGGGATCGCCGCGAAGATATTCCCTTATTATTCTTACATTTTGCCCGTATGGCCTCGGCGCGCTATCACAAGGC CTTAATTGCCCTCAATGCCGAGCAGAATGCCATCCTCAGCTCCCACGACTGGCCGGGTAATGTGCGTGAGCTGCGAAATC TGGCCGAACGTTATGTGTTACTCGGTGGCGAAGCCGCCTTCGCAGGCACCTTAGGCAACGCGCCCAGTCTGCATACCAGT ATGTCATTGCTGCAACGGGTCGAGTTTTTTGAGCGGGTATTGATTGAAGAAGCCTTAAGCCATAACAAGGGCAGCATTAA GCAGACAATGGAGCAACTCGAACTGCCCCGCAAAACCTTGTACGACAAGATGCGTAAATACGATTTAGACCGCAAGCAGT ATATCAACGCTGACGAGTAA Protein sequence : MSLPNSIQDYSVLIIDDEPHIGTVLVQLFELEGIKAFATTDPKGIAKLLDRDWAGVVISDVNMPQLDGISLMQQIRQQDP DLPVVLLTGFGDIAMAVNALKQGAYDFLEKPFNNEHMLDVVKRALDKRSLTLENRKLKKELESHNVPGPRILGHSVGILR MRHIIDQVIDTPADVLIEGETGTGKELVARYLHDHSSRNQANFVAINCGAIPENLIESELFGAEAGAFTGVDKLRVGKFE YANGGTLFLDEIESTPLSLQVKLLRVLEDRKVERLGSNKSINLDIRVIAATKVDLKSLCDTGEFRQDLLYRLNLVTVPIP PLRDRREDIPLLFLHFARMASARYHKALIALNAEQNAILSSHDWPGNVRELRNLAERYVLLGGEAAFAGTLGNAPSLHTS MSLLQRVEFFERVLIEEALSHNKGSIKQTMEQLELPRKTLYDKMRKYDLDRKQYINADE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpS | AAC34753.1 | HrpS | Virulence | Hrp PAI | Protein | 6e-50 | 41 |
| hrpS | NP_791207.1 | type III transcriptional regulator HrpS | Virulence | Hrp PAI | Protein | 4e-52 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Shewmr7_1424 | YP_737480.1 | two component, sigma54 specific, Fis family transcriptional regulator | VFG1249 | Protein | 9e-64 | 43 |
