|
Name : fliP (Shewmr7_1359) Accession : YP_737415.1 Strain : Shewanella sp. MR-7 Genome accession: NC_008322 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 1574600 - 1575346 bp Length : 747 bp Strand : + Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus DNA sequence : ATGATGAAGTACATACTCACCTTGATTGGGTTTAGTACCCTGTTGTTTGCCGCATCGGTGGGCGCGGCCGATGGTGTATT GCCGGCGGTAACCGTAAAAACCGCTGCCGATGGTTCGACCGAATATTCGGTGACCATGCAGATCCTATTGCTAATGACTT CGCTGAGCTTTATTCCTGCGATGGTCATTATGTTGACTTCCTTTACTCGCATCATAGTGGTGCTCTCGATTTTGCGCCAA GCCATTGGTTTACAACAGACACCTTCTAACCAAGTTTTGATTGGCATGAGCCTGTTTATGACCTTTTTCATTATGGCGCC AGTGTTCGACAAAATTTATGACCAAGGGGTTAAGCCTTATATTGATGAGCAGCTCACGCTGCAACAGGCCTTCGATAAGG GCAAAGAGCCATTACGGGCATTTATGTTAGGGCAGGTGCGTACCACAGATCTGAAAACCTTTATCGATATTTCGGGGTAT CAAAACATTAATTCCCCAGAAGAAGCACCAATGAGCGTGTTGGTGCCAGCTTTTATCACCAGTGAACTAAAAACCGCCTT TCAAATTGGCTTTATGTTGTTTGTGCCTTTTTTAGTGCTAGATCTCGTGGTGGCCAGTATCTTGATGGCCATGGGTATGA TGATGCTCTCGCCGATGATTGTTTCTTTACCCTTCAAGATCATGTTGTTTGTGCTTGTCGATGGTTGGGGCCTGGTAATG GGCACTTTAGCCAATAGCTTTGGTTAG Protein sequence : MMKYILTLIGFSTLLFAASVGAADGVLPAVTVKTAADGSTEYSVTMQILLLMTSLSFIPAMVIMLTSFTRIIVVLSILRQ AIGLQQTPSNQVLIGMSLFMTFFIMAPVFDKIYDQGVKPYIDEQLTLQQAFDKGKEPLRAFMLGQVRTTDLKTFIDISGY QNINSPEEAPMSVLVPAFITSELKTAFQIGFMLFVPFLVLDLVVASILMAMGMMMLSPMIVSLPFKIMLFVLVDGWGLVM GTLANSFG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcR | ABA47279.1 | HrcR | Virulence | S-PAI | Protein | 3e-16 | 42 |
| hrcR | AAT96262.1 | HrcR | Virulence | S-PAI | Protein | 1e-14 | 42 |
| hrcR | AAT96303.1 | HrcR | Virulence | S-PAI | Protein | 1e-14 | 42 |
| hrcR | AAT96343.1 | HrcR | Virulence | S-PAI | Protein | 1e-14 | 42 |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 4e-16 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_737415.1 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 9e-58 | 67 |
| fliP | YP_737415.1 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 3e-50 | 60 |
| fliP | YP_737415.1 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 1e-50 | 58 |
| fliP | YP_737415.1 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 1e-47 | 53 |
| fliP | YP_737415.1 | flagellar biosynthesis protein FliP | VFG0394 | Protein | 4e-17 | 41 |
