Gene Information

Name : Shewmr7_1234 (Shewmr7_1234)
Accession : YP_737290.1
Strain : Shewanella sp. MR-7
Genome accession: NC_008322
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 1445962 - 1446915 bp
Length : 954 bp
Strand : +
Note : PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: son:SO3386 hypothetical protein

DNA sequence :
ATGTACAAGTTTAATCCGCAGCGAATTCAAATCGGGATCAGTGCCTGCTTACTAGGGGAGAAGGTGCGCTTTGACGGTGG
GCATAAAAATTCTTCCTATTGTAATCAAGAGATTGCCCCCTTTTTTGATTATGTCCCCTTGTGTCCAGAAATGGCGATTG
GCCTAGGTGCACCGCGAAAAAGCATTCGATTAGTGCGCGATGGTGAGCAGATCCGAGTGCAGAGCGGTGATGGCAGCTTA
GATGTCACCGACAAACTCAATCGCTTTAGCGAGCAAAAGGTTGAGGAATTAGGCTTTTTAGGCGGTTACTTACTCTGTGC
CAAATCGCCGACCTGCGGTATGGAACGGGTGACTGAGTACAAAATCGGTACTAATAATGGCACTAAATCAGGCATTGGGG
TGTTTGCCCGTAAATTAATGGAACGCTACCCCTATCTCCCCGTCGAGGAAGAAGGTCGCCTGCACGATATGGTGCTGCGG
GAAAACTTTTTTACCCGAGTATATGCCTATCACGACTGGCATAAGATGTGTCATGAGGGCCTAACCAAGCACAAGTTAGT
GAAGTTTCATTCCCGCTATAAGTATCTATTGATGGCCCATAGCCCAAAATGGTATCGAGAGCTTGGGCCGATTGTGGCCA
ATATTGAAGACTTAGATCAAACCGCCGAGCGCTATTTTGCGGGTTTTATGACCGCCTTAAAAATCAATGCGACCCGTCGA
AACCATACCAGCACCTTACAACATATTCAGGGCTATTTTAAAAAGCATTTGAATAAGGAACAGAAGTTAGAACTGTCTGA
AATGATTATGAAATATCGCCAAGGACTTCTCCCTTTGCTGGTGCCTATCACTTTGATTAACCACTATTTGCGCCAATTCC
CCACCCCCTATATTGAGGATCAAGTGTACTTAAATCCCCATCCCGAGGAATTGAAGCTGCGCTATGCCTATTAA

Protein sequence :
MYKFNPQRIQIGISACLLGEKVRFDGGHKNSSYCNQEIAPFFDYVPLCPEMAIGLGAPRKSIRLVRDGEQIRVQSGDGSL
DVTDKLNRFSEQKVEELGFLGGYLLCAKSPTCGMERVTEYKIGTNNGTKSGIGVFARKLMERYPYLPVEEEGRLHDMVLR
ENFFTRVYAYHDWHKMCHEGLTKHKLVKFHSRYKYLLMAHSPKWYRELGPIVANIEDLDQTAERYFAGFMTALKINATRR
NHTSTLQHIQGYFKKHLNKEQKLELSEMIMKYRQGLLPLLVPITLINHYLRQFPTPYIEDQVYLNPHPEELKLRYAY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 1e-70 47
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 1e-70 47
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 1e-70 47
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 6e-71 47
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 7e-71 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shewmr7_1234 YP_737290.1 hypothetical protein VFG0490 Protein 4e-71 47