Gene Information

Name : Shewmr4_0863 (Shewmr4_0863)
Accession : YP_733000.1
Strain : Shewanella sp. MR-4
Genome accession: NC_008321
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1015051 - 1015791 bp
Length : 741 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO3692 ABC transporter, ATP-binding protein

DNA sequence : 
ATGTTATCAATGAAGAATATCAGCAAGGTTTTTAAAACGGACTTAGTGGAAACCCACGCGCTGCGGGATTTCAACCTTGA
GGTGAATGAGGGCGAGTTTGTGGCGGTCACTGGTCCTTCTGGCTCAGGCAAAACCACCTTCTTAAATATCGCAGGCTTGC
TCGAAGGCTTCACCCATGGGGATTATTTTTTAGATGGAATTAATGTCTCTAACCTTAGTGATAACAAGAGTGCCGCCGTA
CGCAACGAGAAGATTGGCTTTATCTTCCAAGGCTTTAACTTGATCCCCGATCTTAACCTCGCGGAAAATATTGAGGTGCC
GCTGCGCTACCGTGGTTTTAGTGCCAAGGAGCGTAAACGCCGTGTGGAGCAAGCGTTAGAGCAAGTGGGCTTAGGTGCGC
GGATGAAGCATTTACCGACCCAGCTATCCGGCGGTCAGCAGCAAAGGGTGGCGATTGCCCGCGCTTTAGCGGGGGAGCCA
CGCTTCCTGCTCGCCGACGAACCTACGGGTAACCTCGACAGTTTAATGGCCCGCCAAGTGATGGAATTATTAGAGAATAT
TAACCAATCTGGCACCACGATCATCATGGTGACCCACGATCCTGAACTGGCCCGCCGTGCCCAGCGCAATATTCAAATAG
TCGATGGTCAGGTCTGCGACTTTACCATGTATCAACCCAATGCGGCCCGCAGTGCAAGCCACGGCAGTGTCGATAAACTG
GTTGCTAACGCCCAAGGCTAG

Protein sequence : 
MLSMKNISKVFKTDLVETHALRDFNLEVNEGEFVAVTGPSGSGKTTFLNIAGLLEGFTHGDYFLDGINVSNLSDNKSAAV
RNEKIGFIFQGFNLIPDLNLAENIEVPLRYRGFSAKERKRRVEQALEQVGLGARMKHLPTQLSGGQQQRVAIARALAGEP
RFLLADEPTGNLDSLMARQVMELLENINQSGTTIIMVTHDPELARRAQRNIQIVDGQVCDFTMYQPNAARSASHGSVDKL
VANAQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-30 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-33 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shewmr4_0863 YP_733000.1 ABC transporter-like protein NC_008702.1.4606598. Protein 1e-45 52
Shewmr4_0863 YP_733000.1 ABC transporter-like protein NC_012469.1.7686878. Protein 3e-52 50
Shewmr4_0863 YP_733000.1 ABC transporter-like protein CP001581.1.gene798.p Protein 5e-38 46
Shewmr4_0863 YP_733000.1 ABC transporter-like protein CP001581.1.gene598.p Protein 4e-30 41