Gene Information

Name : Shewmr4_0795 (Shewmr4_0795)
Accession : YP_732932.1
Strain : Shewanella sp. MR-4
Genome accession: NC_008321
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 929869 - 930771 bp
Length : 903 bp
Strand : +
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: son:SO0950 integrase/recombinase XerD

DNA sequence : 
GTGGCTAAAACCTATCAGTGCGATCCGCTTATCGATGCCTTTCTCGATGATCTTTGGTCCAGTAAGGGCTTAAGTGATAA
CACCTTGAGTGCCTATCGCACCGATTTACGCCATTTTGACCGCTATCAACAGAGCCAAGGCCTGCGGTTAATCGAGGTGG
TGCAAGCCGATGTGCGCGCCTATTTAGCCTACCGAGTCGAACAACAATTTGCCCGCACCAGTAGCGCACGTCTACTTAGC
AGTTTACGGCGTTTTTATACTTATTTATTGCAGACCAAGCAGATTGCTGGCGATCCTATGGCGCTGATCGAATCGCCCAA
ATTGAGTCGGCAATTGCCAGATTCCTTAAGTGAGTCACAGGTCGATAGATTGCTGGCCGAGCCCAATGTGGACGACCCAG
TTGAGTGCCGTGATAAAGCCATGCTTGAACTCTTATATGCGACTGGATTGCGGGTGAGTGAGCTGGTGGGGCTCACTCTG
GAGCAGATGAGTTTGCGCCAAGGTCTAGTGCGGATTGTGGGTAAGGGCGGTAAAGAACGGTTAGTGCCTATGGGCGAGCT
GGCCATTACCGAGGTTGAACGCTACTTAAGCTCTGCGCGCCATGAGTTGTTGGGCAATGTCCAGTCCGATGTGGTATTTC
CATCTAAGCGCTCGCAGATGATGACGCGGCAAACTTTCTGGCATAGGATCAAGCTCTACGCGAGCCGTGCCGGCATCGAA
ACTGAACTTTCACCCCATACCCTGCGCCATGCCTTTGCGACCCACTTACTCAACCATGGCGCCGACCTTAGGGTGGTACA
ATTACTCTTAGGTCACAGTGACTTATCGACGACTCAAATTTATACCCATGTGGCGCGAGCGAGATTACAAGAGCTACATC
AACAGCATCATCCTCGTGGTTAA

Protein sequence : 
MAKTYQCDPLIDAFLDDLWSSKGLSDNTLSAYRTDLRHFDRYQQSQGLRLIEVVQADVRAYLAYRVEQQFARTSSARLLS
SLRRFYTYLLQTKQIAGDPMALIESPKLSRQLPDSLSESQVDRLLAEPNVDDPVECRDKAMLELLYATGLRVSELVGLTL
EQMSLRQGLVRIVGKGGKERLVPMGELAITEVERYLSSARHELLGNVQSDVVFPSKRSQMMTRQTFWHRIKLYASRAGIE
TELSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVARARLQELHQQHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-56 57
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-56 57