Gene Information

Name : Shewmr4_0678 (Shewmr4_0678)
Accession : YP_732815.1
Strain : Shewanella sp. MR-4
Genome accession: NC_008321
Putative virulence/resistance : Virulence
Product : KpsF/GutQ family protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0794
EC number : 5.3.1.13
Position : 785683 - 786660 bp
Length : 978 bp
Strand : -
Note : KEGG: son:SO3956 carbohydrate isomerase, KpsF/GutQ family; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS)

DNA sequence :
ATGGTAGACCAATCACAATTGCGCCAGTGGGGCTGTAAAGTCATCGATATTGAAAAATCGGCCCTCGACAATCTTTATCA
ATATGTCGATTCCGTTGAATTCGCCCAAGCCTGCGAACTTATTCTCAACTGTACCGGCAAAGTGATAGTGATGGGGATGG
GAAAATCAGGCCATATTGGCAATAAAATCTCGGCCACCCTAGCCAGCACAGGTACCCCAGCTTTTTTTGTCCATCCAGGT
GAAGCCAGCCATGGTGACCTAGGCGTGCTCTCGGACAATGATGTGATTCTTGCGATTTCCAACTCGGGCGAGTCGAGCGA
AATCCTCGCGCTGATGCCCGTTATCCAACGTAAAGCCATCCCAGTGATTGCCATGACAGGCAAGCCAGAATCCACCATGG
CGCGTCTATCTAAAATTCATTTATGTATTGAAGTACCAGAGGAAGCCTGCCCGCTTGGGCTTGCGCCAACCTCAAGTACC
ACAGCAACCTTAGTCATGGGCGATGCCATCGCCATTGCCCTCCTGCAAGCCAAAGGTTTTACCCGAGAAGATTTCGCCAT
GTCCCATCCGGGCGGCGCCTTAGGTCGTAAGCTGCTGCTTAAGGTCAGCAACGTGATGCACAGCGGTGATGACTTACCTC
TGGTTAAACACGATATCTGCATCACCGATGCCCTGTATGAGATCTCCAAGAAAGGCCTTGGCATGACCGCAGTTATCGAT
GAGCAAAACAAACTCGTGGGTATCTTTACCGACGGTGACCTGCGCCGCGTTATCGATGCCCAAGTCAACCTACGCACCAC
GCCGATTGCCGATGTGATGACGCGAAACTGTGTCACAATTACTGAAAACGTTTTAGCGGCACAGGCGCTGCAAGTGATGG
ATTCCAAAAATATCAACGGCCTGATAGTGATAGATAAAGACAATCATCCTGTCGGTGCGCTCAATATGCTCGATATGGTT
AAAGCGGGAGTGATTTAA

Protein sequence :
MVDQSQLRQWGCKVIDIEKSALDNLYQYVDSVEFAQACELILNCTGKVIVMGMGKSGHIGNKISATLASTGTPAFFVHPG
EASHGDLGVLSDNDVILAISNSGESSEILALMPVIQRKAIPVIAMTGKPESTMARLSKIHLCIEVPEEACPLGLAPTSST
TATLVMGDAIAIALLQAKGFTREDFAMSHPGGALGRKLLLKVSNVMHSGDDLPLVKHDICITDALYEISKKGLGMTAVID
EQNKLVGIFTDGDLRRVIDAQVNLRTTPIADVMTRNCVTITENVLAAQALQVMDSKNINGLIVIDKDNHPVGALNMLDMV
KAGVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 2e-55 43
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 2e-55 43
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 4e-55 43