Gene Information

Name : Shewmr4_0633 (Shewmr4_0633)
Accession : YP_732770.1
Strain : Shewanella sp. MR-4
Genome accession: NC_008321
Putative virulence/resistance : Virulence
Product : molydopterin dinucleotide-binding region
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0243
EC number : -
Position : 732536 - 735643 bp
Length : 3108 bp
Strand : -
Note : PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: ppr:PBPRB0003 putative tetrathionate reductase, subunit A

DNA sequence :
ATGGATAAGAGTAAACGTCGTTTTATCAAAGGCGCAGCTGTGACGGGTGGCGTGGGATTATTTGCCGCAGGTTACAGCCA
TACCTTAGCGCAAATGGGCAAAGGGGTCGTGAATGGCAGTTCAGGCAAAACCACCCAAGATCCCATCCATGGCAATTCGC
TAGCCCCTGAATATAAAGTGGATTTAACCTCAGGCCAGCTGATTGGCAACGATGAACAACGCATCGCCAATACCATGTGT
CTCGGCTGCTGGACCAAGTGTGGCGTGCGCGCCCGTATCGATAATAAAACAGATAAGATCCTCCGCATCAGCGGTAATCC
CTATCATCCACTCTCGGCGCGGGAACATATCGACTTCGATACCCCGATCAAAACCGCCTTAGTCGGTTTAAGCGCCTATC
AGGAGCAGGGCTTACAGGGGCGCTCTACCGCCTGCGCCCGTGGCAATGCCATGTTAGAACAACTAGATAGTCCCTATCGC
GTCACCCAATGCCTTAAACGGGTCGGGCCACGCGGCAGTGGTCAATGGCAAAGCATTAGTTTCGAGCAACTGCTGACCGA
GGTCGTCGATGGCGGTGACTTATTTGGCGAAGGCCATGTCGAAGGCTTAAGAGCGATTCGCGATATCAGCACGCCACTCG
ATGCCAATAATCCTGAATATGGCCCCAAGGCCAACCAATTATTGGTGTCGAACGCTTCGGATGAGGGCCGCGATGTCATC
ATTAAACGCTTTACCTTCAATAGTTTCGGTACACGAAATTTTGCCAACCACGGCGCCTATTGCGGCTTTACCTATCGCGC
AGGTGCAGGTGCCCTGCTCGACGATTTAAAAAAGTACGCTCACCTTAAGCCCGATTGGGACAATAGCGAGTTTCTGCTGT
TTATCGGCACCTCGCCGCAACAGTCGGGCAATCCTTTTAAACGCCAAGCACGGCAGTTGGCCAACGCTCGGGTCGATGGG
CGAGAATTCAGTTATGTGGTGGTGTCGCCCATGTTGCCCAACACCTCGAACCAGCCCTGCGCGGGCAACAATACTTGGCT
GCCCATTCGCCCCGCAACCGACTCCGCCCTCGCCATGGGCATGTTGCGCTGGATTATCGATAACCAGCGCTACGCCAGTG
CGTTTTTAACCGCGCCCAATGCCGAGGCGGCGAAAGCAGCAGGCTACCGAGGCTTTAGTAATGCCAGCTTCTTAATCATC
AGCACGCCAAATCACCCCAGATACGGCCAATATTTGTATGCCAGTGATCTCGGCTTGCCCTTCGAAGGTAAAGCTTACGG
CGAGCAGGATTCACCACTGGTTGTCGAGGCCGCTACTGGGCAGATCCTACCTGCCGGACAATGCGCCAAGGCGCAACTTG
AGGTTGAGCAAAGCGTGAATACGCCAAAGGGCGAGCTGAGCGTGAAATCGAGTTTTCAGCTGCTCAGTGAAGCCGCGCGC
AGCGTCGAGATGGCCGACTACGCCAAGGAATGCGATATCAGCGAGGCGCAAATTGCCGCCCTCGCCCACAAATTCACAGA
TCACGGCACTAAGGCGGCGGTGATTTCCCACGGCGGTACCATGAGTGCTAACGGTTTTTACAGTGCATGGGCGATCATGA
TGCTCAACGCCATGATTGGTAACCTAAATCTTAAGGGCGGCGCTATGGCTAAGGGCGGCACCTTCCCCGCCTTTGGTGCT
GGCCCAAGGTACAATTTGCAGGACTTTGACGGCATGGTCGAACCTAAGGGCGTATTCCTTTCCCGCTCTAAGTTCCCCTA
CGAAAAAACCTCTGAGTACCGCCGTAAAATCGAAGCGGGAGAGTCGCCCTATCCGTCGAAGGAGCCTTGGTTCCCCATAT
CATCGCCCCTGCTGGGCGAACATTTAACCGCGGCGGTGCACGGTTATCCCTATCGACTCAAGGCGTGGATCAACCATATG
GGCAACCCCATTTATGGCCAGGCGGGTCTCGGCGAAGCCATTGGTGAACAATTAAAAGATCCCAAAGTATTATCGCTATT
TATCAGCATCGACAGCTTTATCAATGAGACCTCGGCGCTGTCGGACTACATAGTGCCCGACACCTTAACCTATGAATCTT
GGGGCTGGAGCGCCGCGTGGCACGGTACGCTCACCAAAGAAGCCACCGGGCGCTGGCCGATTGTCGAGCCGAGGGTCGCC
AAAACTGCCGACGGCGATGTGATTTGTATGGAGTCCTTCCTTAGCCAAGTGGCGATAAAACTTAATCTGCCCGGCTTTGG
CGCCAATGCTATCAAGGCCGCAGATGGCAGTTTGCATCCTTTGAGCCGCGCGGCCGATTTCTCGCTCTACGGCGCGGCGA
ACGTGGCTTACCTTGGTAAACCCGTTGCCGATATCAATGCCGAAGATATGTACTTCAGTGGTGTTGGGCGCATTCAAGCG
GAACTCAATGCCAGACTCAAACCCGAAGAGGTCAAAAAAGTCAGTTACTTATTTGCCCGTGGCGGCCGCTTTGAGAATAT
CAGCGCGGGTCGCGACGAGGCGGGCAACCCCAGCAAGGTTTGGCCAAAACCTTTAATGCTGTGGAACCCAGAAGTCGGCA
GTCGGCGCAACAGCTTGAGCGGTGAATATATGAGTGGCTGTCCACGGCGTTATCACCCTGCGCTCGCCAACGGCACACCC
TTGGAGCAAGCATTCGATAAGTCACAGTGGCCGCTGCTGATCAGCAGTTATAAGTCGCATACTATGAGTTCGATGAGCAT
AGGTTCGGACCGTTTGCGCCAAGTGCACCCCAACAATCCGGTGCGCATCAATGAACAAACCGCGGCACGTTTTGGCATCA
AGACCGGAGATACGGTCAAGATCAGCACGCCAAATGGCAGTGTGGTGGCCTTGGTGGAATGTGTGGCGGGCGTGCATCCC
GACTGCATTGCCATCGAACACGGTTATGGCCATAAGGAGTTAGGCGCGCGGGATATCGTCATCGATGATAAAAAGATTGC
CGCCAATCCGCTGATCCGCGTCGGAGTCAATATGAACGACTTGAATCTGTTCGACCCAAGCCGCCATGGGCGCTATCCGC
TGGTGGACTGGGCCAGCGGTGCATCGGCGCGGCAAGGACTTCCCGCCAAGATAGAGAAAATCGCTTAA

Protein sequence :
MDKSKRRFIKGAAVTGGVGLFAAGYSHTLAQMGKGVVNGSSGKTTQDPIHGNSLAPEYKVDLTSGQLIGNDEQRIANTMC
LGCWTKCGVRARIDNKTDKILRISGNPYHPLSAREHIDFDTPIKTALVGLSAYQEQGLQGRSTACARGNAMLEQLDSPYR
VTQCLKRVGPRGSGQWQSISFEQLLTEVVDGGDLFGEGHVEGLRAIRDISTPLDANNPEYGPKANQLLVSNASDEGRDVI
IKRFTFNSFGTRNFANHGAYCGFTYRAGAGALLDDLKKYAHLKPDWDNSEFLLFIGTSPQQSGNPFKRQARQLANARVDG
REFSYVVVSPMLPNTSNQPCAGNNTWLPIRPATDSALAMGMLRWIIDNQRYASAFLTAPNAEAAKAAGYRGFSNASFLII
STPNHPRYGQYLYASDLGLPFEGKAYGEQDSPLVVEAATGQILPAGQCAKAQLEVEQSVNTPKGELSVKSSFQLLSEAAR
SVEMADYAKECDISEAQIAALAHKFTDHGTKAAVISHGGTMSANGFYSAWAIMMLNAMIGNLNLKGGAMAKGGTFPAFGA
GPRYNLQDFDGMVEPKGVFLSRSKFPYEKTSEYRRKIEAGESPYPSKEPWFPISSPLLGEHLTAAVHGYPYRLKAWINHM
GNPIYGQAGLGEAIGEQLKDPKVLSLFISIDSFINETSALSDYIVPDTLTYESWGWSAAWHGTLTKEATGRWPIVEPRVA
KTADGDVICMESFLSQVAIKLNLPGFGANAIKAADGSLHPLSRAADFSLYGAANVAYLGKPVADINAEDMYFSGVGRIQA
ELNARLKPEEVKKVSYLFARGGRFENISAGRDEAGNPSKVWPKPLMLWNPEVGSRRNSLSGEYMSGCPRRYHPALANGTP
LEQAFDKSQWPLLISSYKSHTMSSMSIGSDRLRQVHPNNPVRINEQTAARFGIKTGDTVKISTPNGSVVALVECVAGVHP
DCIAIEHGYGHKELGARDIVIDDKKIAANPLIRVGVNMNDLNLFDPSRHGRYPLVDWASGASARQGLPAKIEKIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrA NP_456144.1 tetrathionate reductase subunit A Virulence SPI-2 Protein 0.0 50
ttrA NP_805054.1 tetrathionate reductase subunit A Virulence SPI-2 Protein 0.0 50
ttrA YP_216391.1 tetrathionate reductase complex subunit A Virulence SPI-2 Protein 0.0 50
ttrA NP_460348.1 tetrathionate reductase complex subunit A Virulence SPI-2 Protein 0.0 50
ttrA CAB37416.1 tetrathionate reductase subunit A (TtrA) Virulence SPI-2 Protein 0.0 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shewmr4_0633 YP_732770.1 molydopterin dinucleotide-binding region VFG0484 Protein 0.0 50