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Name : Shewmr4_0583 (Shewmr4_0583) Accession : YP_732720.1 Strain : Shewanella sp. MR-4 Genome accession: NC_008321 Putative virulence/resistance : Unknown Product : methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor Function : - COG functional category : N : Cell motility COG ID : COG0840 EC number : - Position : 672707 - 674281 bp Length : 1575 bp Strand : + Note : TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: son:SO0584 methyl-accepting chemotaxis protein DNA sequence : ATGAGAAAAAATTTACCAATAACACAGCGGGAATACGACTATCCAGCGGATTGGATTTTACTGTCGACGACGGACACTAA GAGTCATATCACTTACGCCAATCCATCATTTTGTACCGTTGCGGGATACGAGCTTAGCGCCATGTTGGGGCAACCCCATA ATATGGTGCGTCATCCCGATATGCCCCCCGAAGCATTTGAAGATCTGTGGAAAACCATCCGAAAAGGCGAGCCTTGGAAA GGCATAGTCAAAAATCGCTGTGCCAATGGCGACCATTATTGGGTCGACGCCTATGTGTCGCCGATTATGGTCAATGGTCA GGTGGCCGAATTTCAATCGGTACGCACTAAACCCAGCCGCGACCAGATAAACCGAGCAGAAGCCGTCTATGCCGAATTAA ATAAGAGTGGTCAAGTTAAGGCATTAAAACGCACCTTAGAAATGCCGACTCAGTTGATGCTACTCGCCTTAGTTGCTCTG TTGCCCATGCTGTATTTGGCGCTGCAGATTGGAGCGGTGGGATTTGTCGCGCTTGCCATTAGTGCTCTGGCACTTTTTAT TGGTGGCAATATGATTTTAGGGCGTTATCGGGCGCTGGTCGCTAAGGCGAAGAAAATCTACAACAACCCTTTGATGGCAC ATATCTATACCGGAAAATCCGATGATCTAGGCGCGATCGATCTGGCGCTGCAAATGCAAACCTCAGAGTTAAAATCCATG TTAGGTCGCGCCCGCGATTCCTGCGATAAGGTGAGTAAGCAAGCCAAAGTTTCGGCGGCGAAAGGCGAAGAGATTCAAGG GACAAGCCAGTCACAGCTGGCCGAGATTGAACAAGTCGCGACGGCCATGCAACAGATGACGGCGACACTTGGGGATATGT CTTCTAACTGTGCCGATGCGGCGAGCGCTTCACAGATGGCGTCGCAGCAGACAATCAATGGCGATAAAACTGTTGTCAGT ACCATTCAATCGATTCAGGCCATGGCGCAGCAGTTGCAAGAAACCTCGCAGGTGATCACTGAGTTAGAAGGGCATAGCAG GGATATAGGCACAGTGCTGGATGTGATCCAGGGGATTGCCGAACAGACAAATTTATTGGCACTAAACGCCGCGATTGAAG CGGCGCGAGCGGGTGAGCAAGGGCGTGGTTTTGCCGTAGTTGCCGATGAGGTGCGGGCATTAGCGCAGCGAACCCATGAT GCCACCAAGGAAATCCACACAATGATCAACCTGTTGCAGCAGGGCACCCACAAGGCGGTGCGCAGCATGCAAGAAGGAGT CGATGCCGCCGCTGAATGTATTACCACTGCGGATCTTGCGGGCACGGCGCTGCGTACCATACGTGAAGCTATCACTACCA TTACGGATATGACCCACCATATTGCCAGTGCGGTAGAGGAGCAATCGAGCGTGGCGAACGAGATGAATCGCAGCGTGGTC AATGTGTCGCAATTTACCCATTCCAGCCATCAACTCGGCTGTGAAATGGTCAGCATCAATGATGAGGTGATAGGCGAAAT GGACTCCCATACAGTGCTGGTCGGGCAGTTTTTAAAGCGCAGCTTTAAGGTATAG Protein sequence : MRKNLPITQREYDYPADWILLSTTDTKSHITYANPSFCTVAGYELSAMLGQPHNMVRHPDMPPEAFEDLWKTIRKGEPWK GIVKNRCANGDHYWVDAYVSPIMVNGQVAEFQSVRTKPSRDQINRAEAVYAELNKSGQVKALKRTLEMPTQLMLLALVAL LPMLYLALQIGAVGFVALAISALALFIGGNMILGRYRALVAKAKKIYNNPLMAHIYTGKSDDLGAIDLALQMQTSELKSM LGRARDSCDKVSKQAKVSAAKGEEIQGTSQSQLAEIEQVATAMQQMTATLGDMSSNCADAASASQMASQQTINGDKTVVS TIQSIQAMAQQLQETSQVITELEGHSRDIGTVLDVIQGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAQRTHD ATKEIHTMINLLQQGTHKAVRSMQEGVDAAAECITTADLAGTALRTIREAITTITDMTHHIASAVEEQSSVANEMNRSVV NVSQFTHSSHQLGCEMVSINDEVIGEMDSHTVLVGQFLKRSFKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0512 | NP_230163.1 | methyl-accepting chemotaxis protein | Not tested | VSP-2 | Protein | 2e-70 | 43 |
