Gene Information

Name : Shewmr4_3885 (Shewmr4_3885)
Accession : YP_736005.1
Strain : Shewanella sp. MR-4
Genome accession: NC_008321
Putative virulence/resistance : Virulence
Product : UDP-glucose/GDP-mannose dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : -
Position : 4635164 - 4636393 bp
Length : 1230 bp
Strand : +
Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: son:SO4687 UDP-glucose 6-dehydrogenase

DNA sequence : 
ATGACATATTCTAATGCCGCAGAAAATGCTAGTTTGAGAAACAAAATGCCAAACTGTATAAAACCTATGAACATAGTTGT
AGTTGGAATGGGCTATGTTGGCCTATCGAACGCGGTTTTACTCGCCCAGCAAAACCATGTAGTAGCGATTGATTTGATGC
CCGAGCGCATCGCGTTAGTTAATGCGCGTAAACCAACGGTCGCCGACAGTCTGATTGAAGAATATCTACAGCATAAAACC
TTAAATCTCAGTGCCACGAGCGACAAAAACGTCGTTAAAGAAGCCGATTTTGTCATCTTAGCCACTCCTACGGATTACGA
CCCACAAACCAACTACTTTAATACTCAGTCGGTCGAACGGGTGGCGAAGGAAGTGCTAGCACTGAATCCTGACACCACCA
TTGTCATCAAATCGACGGTGCCAGTGGGTTTTACCGAAGGGCTGAGAAGTAAACTCAACAGTAACAATATCTTATTTTCG
CCTGAGTTTTTGCGTGAAGGTAAGGCGCTTTATGATAACCTGCACCCCTCACGGATCATAGTGGGTGAACGTTCAGAGCG
CGCCCAAGCCTTTGCCGATCTGCTTGCTCGCGCCGCCATTAAGCAAGATATTCCGATTTTACTCACAGACAGTACTGAGG
CCGAAGCGATTAAGTTATTTGCCAACACTTTTTTAGCCATGCGCGTCGCCTACTTTAATGAGTTGGACTCCTATGCGGAG
AGCCGAGGGCTCAACACCCGCCAGATTATCGAAGGCGTATGTTTAGATCCGCGCATCGGCGATTACTATAACAATCCTTC
CTTCGGTTATGGCGGTTACTGTCTGCCCAAGGACACTAAGCAATTGCTGGCCAACTATAACGATGTGCCTAACAATCTGA
TCAGCGCCATTGTCGATTCCAACACGACCCGCAAAGATTTTATCGCCAACGCGATTATCAGTAAGCAACCGAAGCGAGTG
GGGATCTATCGCTTAATCATGAAATCCGACTCAGACAACTTCCGCGCCTCGGCGGTACAAGGTGTGATGAAACGCATTAA
GGCCAAGGGCATCGAAGTCGTGGTCTATGAGCCAGTACTCAAGGAAGACGAGTTTTTTAACTCGAAAGTGATCCGCGATT
TACATGAATTTAAAGCCATGTGCGATGTGATTATTTCTAACCGTATGGCCAATGAACTCGAAGATGTCGCCGCTAAGGTA
TACACCCGGGATCTGTTCCATCACGACTAA

Protein sequence : 
MTYSNAAENASLRNKMPNCIKPMNIVVVGMGYVGLSNAVLLAQQNHVVAIDLMPERIALVNARKPTVADSLIEEYLQHKT
LNLSATSDKNVVKEADFVILATPTDYDPQTNYFNTQSVERVAKEVLALNPDTTIVIKSTVPVGFTEGLRSKLNSNNILFS
PEFLREGKALYDNLHPSRIIVGERSERAQAFADLLARAAIKQDIPILLTDSTEAEAIKLFANTFLAMRVAYFNELDSYAE
SRGLNTRQIIEGVCLDPRIGDYYNNPSFGYGGYCLPKDTKQLLANYNDVPNNLISAIVDSNTTRKDFIANAIISKQPKRV
GIYRLIMKSDSDNFRASAVQGVMKRIKAKGIEVVVYEPVLKEDEFFNSKVIRDLHEFKAMCDVIISNRMANELEDVAAKV
YTRDLFHHD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 2e-89 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shewmr4_3885 YP_736005.1 UDP-glucose/GDP-mannose dehydrogenase VFG0963 Protein 1e-93 52