Gene Information

Name : Shewmr4_3458 (Shewmr4_3458)
Accession : YP_735581.1
Strain : Shewanella sp. MR-4
Genome accession: NC_008321
Putative virulence/resistance : Unknown
Product : amino acid permease-associated protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0531
EC number : -
Position : 4136103 - 4137434 bp
Length : 1332 bp
Strand : -
Note : PFAM: amino acid permease-associated region; KEGG: son:SO4081 amino acid permease

DNA sequence :
ATGAGCCAACAAAATCCAGGCTTAAAGCAAAGCCTTAGTCTGTGGCAAGTGGTTGTGATGGGATTAGCCTATCTCACGCC
TATGGCCGTGTTTGACACCTTTGGCATTGTCTCCGAGATCACCTCAGGCCATGTGGCCACTTCTTACCTGCTCGCGTTAG
CGGGGATCCTGTTTACCGCCTTTAGCTACGGTCACTTAGTACGTAAATATCCCTATGCTGGCTCGGCCTATACCTATGCG
CAAAAAACCTTTAGCCCGAATGTCGGCTTTATGGTGGGCTGGTCATCGCTGCTCGATTATATGTTTATGCCGATGATCAA
TATGTTGCTGGCAAAGATTTACCTCACGGCCATGTTCCCTAACGTCGAACCGTGGATTTTTATCTTTGGTTTAGTCGCTG
TAATGACGGTATTAAACCTGAGGGGCATAGATTTAGTGGCCAATTTTAATGGCGTTATCGTATTCGCCCAGATAGCCATT
ATCTTAGTGTTTATCGGCCTAATGGCCCACAGCCTGTCCCTTGGCGAAGGTGAAGGTGTGATTGCCAGTGTGCGTCCATT
CTATTCCGAAGAGATAAGCCTTGCGCCGCTGTTTACTGGCGCGACTATTCTGTGTTTCTCCTTCTTAGGTTTCGATGGCT
TAAGTTCGTTGAGTGAAGAAACCAAGGACGCTAAGCGAGTCATCCCCCGCGCTATCGTGCTGACGGCGCTGATTGGCGGC
GTGATTTTTGTCAGCGTGTCCTATTTCTTACAGCTGTTTTTCCCTGATATTTCTCGCTTCCAGCAGTTAGATGCTGTGCT
GCCTGAGATAGCCCTGTATGTGGGTGGTAATTTATTCCAGTCAGTGGTGCTGGTGGCCACCACCATTGCGGTGTTGGCCT
CGGGCATGGCCGCCCATGCGGGTGTGGCACGTATTCTCTACGTGATGGGTCGCGACAATATGCTGCCCAATAAAGGCTTT
GGTTATATTCACCCCAAATGGCGCACGCCGGCATTTAACGTGATTCTGGTGGGATTACTGGCGCTTTCGGCGGTGTCCTT
CGATCTCGAAATGGCACTGGCGCTCGTCAACTTCGGGGCGCTGGTGGCCTTTACCTTTGTGAACCTGTCGGTAATAGTGC
AGTTTTATATTAAAGAGAAACGCAACCAATCCTTGAAAGACCACTTTCAATACTTCGTCTTACCCTTGTGCGGCGCGGCG
ACTATTGGTGTGCTGTGGCTAAACCTTGAACCTCAGTCCCTAGAGCTTGGCTTGATTTGGGCGGCAGTTGGGGTCTTGTA
CTTGGCGCTGCGAAGCCTGCGTTTACGCAAGACAGTAGAGTTACAGAATTAA

Protein sequence :
MSQQNPGLKQSLSLWQVVVMGLAYLTPMAVFDTFGIVSEITSGHVATSYLLALAGILFTAFSYGHLVRKYPYAGSAYTYA
QKTFSPNVGFMVGWSSLLDYMFMPMINMLLAKIYLTAMFPNVEPWIFIFGLVAVMTVLNLRGIDLVANFNGVIVFAQIAI
ILVFIGLMAHSLSLGEGEGVIASVRPFYSEEISLAPLFTGATILCFSFLGFDGLSSLSEETKDAKRVIPRAIVLTALIGG
VIFVSVSYFLQLFFPDISRFQQLDAVLPEIALYVGGNLFQSVVLVATTIAVLASGMAAHAGVARILYVMGRDNMLPNKGF
GYIHPKWRTPAFNVILVGLLALSAVSFDLEMALALVNFGALVAFTFVNLSVIVQFYIKEKRNQSLKDHFQYFVLPLCGAA
TIGVLWLNLEPQSLELGLIWAAVGVLYLALRSLRLRKTVELQN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01507.1 putative amino acid/amine transport protein Not tested PAGI-1 Protein 3e-70 44